Gene : Sevir.5G262200 S. viridis v2.1

Defline:  (1 of 1) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) Genomic Order:  2787
Name:  ? Sevir.5G262200 Secondary Identifier:  ? PAC:40630651

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G262200 0.5kb upstream 0.5kb upstream 4649 true Chr_05: 31013718-31018366 Setaria viridis
Sevir.5G262200 0.5kb upstream 0.5kb upstream 500 false Chr_05: 31017867-31018366 Setaria viridis
Sevir.5G262200 0.5kb downstream 0.5kb downstream 4649 true Chr_05: 31013218-31017866 Setaria viridis
Sevir.5G262200 0.5kb downstream 0.5kb downstream 500 false Chr_05: 31013218-31013717 Setaria viridis
Sevir.5G262200 1.0kb upstream 1.0kb upstream 5149 true Chr_05: 31013718-31018866 Setaria viridis
Sevir.5G262200 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 31017867-31018866 Setaria viridis
Sevir.5G262200 1.0kb downstream 1.0kb downstream 5149 true Chr_05: 31012718-31017866 Setaria viridis
Sevir.5G262200 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 31012718-31013717 Setaria viridis
Sevir.5G262200 2.0kb upstream 2.0kb upstream 6149 true Chr_05: 31013718-31019866 Setaria viridis
Sevir.5G262200 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 31017867-31019866 Setaria viridis
Sevir.5G262200 2.0kb downstream 2.0kb downstream 6149 true Chr_05: 31011718-31017866 Setaria viridis
Sevir.5G262200 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 31011718-31013717 Setaria viridis
Sevir.5G262200 5.0kb upstream 5.0kb upstream 9149 true Chr_05: 31013718-31022866 Setaria viridis
Sevir.5G262200 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 31017867-31022866 Setaria viridis
Sevir.5G262200 5.0kb downstream 5.0kb downstream 9149 true Chr_05: 31008718-31017866 Setaria viridis
Sevir.5G262200 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 31008718-31013717 Setaria viridis
Sevir.5G262200 10.0kb upstream 10.0kb upstream 14149 true Chr_05: 31013718-31027866 Setaria viridis
Sevir.5G262200 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 31017867-31027866 Setaria viridis
Sevir.5G262200 10.0kb downstream 10.0kb downstream 14149 true Chr_05: 31003718-31017866 Setaria viridis
Sevir.5G262200 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 31003718-31013717 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183592 5267 Panicoideae View MSA
124589254 5269 Grass View MSA
122045630 5273 Angiosperm View MSA
121344862 5274 Embryophyte View MSA
123428759 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain