Gene : Sevir.5G277300 S. viridis v2.1
Defline:  (1 of 1) PTHR10459:SF38 - DNA LIGASE Genomic Order:  2999
Name:  ? Sevir.5G277300 Secondary Identifier:  ? PAC:40634238
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G277300 0.5kb upstream 0.5kb upstream 11263 true Chr_05: 33114993-33126255 Setaria viridis
Sevir.5G277300 0.5kb upstream 0.5kb upstream 500 false Chr_05: 33125756-33126255 Setaria viridis
Sevir.5G277300 0.5kb downstream 0.5kb downstream 11263 true Chr_05: 33114493-33125755 Setaria viridis
Sevir.5G277300 0.5kb downstream 0.5kb downstream 500 false Chr_05: 33114493-33114992 Setaria viridis
Sevir.5G277300 1.0kb upstream 1.0kb upstream 11763 true Chr_05: 33114993-33126755 Setaria viridis
Sevir.5G277300 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 33125756-33126755 Setaria viridis
Sevir.5G277300 1.0kb downstream 1.0kb downstream 11763 true Chr_05: 33113993-33125755 Setaria viridis
Sevir.5G277300 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 33113993-33114992 Setaria viridis
Sevir.5G277300 2.0kb upstream 2.0kb upstream 12763 true Chr_05: 33114993-33127755 Setaria viridis
Sevir.5G277300 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 33125756-33127755 Setaria viridis
Sevir.5G277300 2.0kb downstream 2.0kb downstream 12763 true Chr_05: 33112993-33125755 Setaria viridis
Sevir.5G277300 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 33112993-33114992 Setaria viridis
Sevir.5G277300 5.0kb upstream 5.0kb upstream 15763 true Chr_05: 33114993-33130755 Setaria viridis
Sevir.5G277300 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 33125756-33130755 Setaria viridis
Sevir.5G277300 5.0kb downstream 5.0kb downstream 15763 true Chr_05: 33109993-33125755 Setaria viridis
Sevir.5G277300 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 33109993-33114992 Setaria viridis
Sevir.5G277300 10.0kb upstream 10.0kb upstream 20763 true Chr_05: 33114993-33135755 Setaria viridis
Sevir.5G277300 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 33125756-33135755 Setaria viridis
Sevir.5G277300 10.0kb downstream 10.0kb downstream 20763 true Chr_05: 33104993-33125755 Setaria viridis
Sevir.5G277300 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 33104993-33114992 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181784 5267 Panicoideae View MSA
124574730 5269 Grass View MSA
122046861 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain