Gene : Sevir.5G340200 S. viridis v2.1
Defline:  (1 of 1) PF02492//PF02881//PF02978 - CobW/HypB/UreG, nucleotide-binding domain (cobW) // SRP54-type protein, helical bundle domain (SRP54_N) // Signal peptide binding domain (SRP_SPB) Genomic Order:  3674
Name:  ? Sevir.5G340200 Secondary Identifier:  ? PAC:40628931
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G340200 0.5kb upstream 0.5kb upstream 4432 true Chr_05: 37762907-37767338 Setaria viridis
Sevir.5G340200 0.5kb upstream 0.5kb upstream 500 false Chr_05: 37762907-37763406 Setaria viridis
Sevir.5G340200 0.5kb downstream 0.5kb downstream 4432 true Chr_05: 37763407-37767838 Setaria viridis
Sevir.5G340200 0.5kb downstream 0.5kb downstream 500 false Chr_05: 37767339-37767838 Setaria viridis
Sevir.5G340200 1.0kb upstream 1.0kb upstream 4932 true Chr_05: 37762407-37767338 Setaria viridis
Sevir.5G340200 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 37762407-37763406 Setaria viridis
Sevir.5G340200 1.0kb downstream 1.0kb downstream 4932 true Chr_05: 37763407-37768338 Setaria viridis
Sevir.5G340200 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 37767339-37768338 Setaria viridis
Sevir.5G340200 2.0kb upstream 2.0kb upstream 5932 true Chr_05: 37761407-37767338 Setaria viridis
Sevir.5G340200 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 37761407-37763406 Setaria viridis
Sevir.5G340200 2.0kb downstream 2.0kb downstream 5932 true Chr_05: 37763407-37769338 Setaria viridis
Sevir.5G340200 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 37767339-37769338 Setaria viridis
Sevir.5G340200 5.0kb upstream 5.0kb upstream 8932 true Chr_05: 37758407-37767338 Setaria viridis
Sevir.5G340200 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 37758407-37763406 Setaria viridis
Sevir.5G340200 5.0kb downstream 5.0kb downstream 8932 true Chr_05: 37763407-37772338 Setaria viridis
Sevir.5G340200 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 37767339-37772338 Setaria viridis
Sevir.5G340200 10.0kb upstream 10.0kb upstream 13932 true Chr_05: 37753407-37767338 Setaria viridis
Sevir.5G340200 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 37753407-37763406 Setaria viridis
Sevir.5G340200 10.0kb downstream 10.0kb downstream 13932 true Chr_05: 37763407-37777338 Setaria viridis
Sevir.5G340200 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 37767339-37777338 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185391 5267 Panicoideae View MSA
124586778 5269 Grass View MSA
122048939 5273 Angiosperm View MSA
121348760 5274 Embryophyte View MSA
123426502 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain