Gene : Sevir.5G318600 S. viridis v2.1
Defline:  (1 of 3) K17913 - carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase (CCD8) Genomic Order:  3443
Name:  ? Sevir.5G318600 Secondary Identifier:  ? PAC:40632158
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7101 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G318600 0.5kb upstream 0.5kb upstream 3184 true Chr_05: 36217720-36220903 Setaria viridis
Sevir.5G318600 0.5kb upstream 0.5kb upstream 500 false Chr_05: 36220404-36220903 Setaria viridis
Sevir.5G318600 0.5kb downstream 0.5kb downstream 3184 true Chr_05: 36217220-36220403 Setaria viridis
Sevir.5G318600 0.5kb downstream 0.5kb downstream 500 false Chr_05: 36217220-36217719 Setaria viridis
Sevir.5G318600 1.0kb upstream 1.0kb upstream 3684 true Chr_05: 36217720-36221403 Setaria viridis
Sevir.5G318600 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 36220404-36221403 Setaria viridis
Sevir.5G318600 1.0kb downstream 1.0kb downstream 3684 true Chr_05: 36216720-36220403 Setaria viridis
Sevir.5G318600 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 36216720-36217719 Setaria viridis
Sevir.5G318600 2.0kb upstream 2.0kb upstream 4684 true Chr_05: 36217720-36222403 Setaria viridis
Sevir.5G318600 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 36220404-36222403 Setaria viridis
Sevir.5G318600 2.0kb downstream 2.0kb downstream 4684 true Chr_05: 36215720-36220403 Setaria viridis
Sevir.5G318600 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 36215720-36217719 Setaria viridis
Sevir.5G318600 5.0kb upstream 5.0kb upstream 7684 true Chr_05: 36217720-36225403 Setaria viridis
Sevir.5G318600 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 36220404-36225403 Setaria viridis
Sevir.5G318600 5.0kb downstream 5.0kb downstream 7684 true Chr_05: 36212720-36220403 Setaria viridis
Sevir.5G318600 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 36212720-36217719 Setaria viridis
Sevir.5G318600 10.0kb upstream 10.0kb upstream 12684 true Chr_05: 36217720-36230403 Setaria viridis
Sevir.5G318600 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 36220404-36230403 Setaria viridis
Sevir.5G318600 10.0kb downstream 10.0kb downstream 12684 true Chr_05: 36207720-36220403 Setaria viridis
Sevir.5G318600 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 36207720-36217719 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122117608 5267 Panicoideae View MSA
124587364 5269 Grass View MSA
122048984 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344649 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain