Gene : Sevir.5G229900 S. viridis v2.1
Defline:  (1 of 1) PTHR12121//PTHR12121:SF48 - CARBON CATABOLITE REPRESSOR PROTEIN 4 // CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 Genomic Order:  2448
Name:  ? Sevir.5G229900 Secondary Identifier:  ? PAC:40630389
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G229900 0.5kb upstream 0.5kb upstream 6960 true Chr_05: 27796558-27803517 Setaria viridis
Sevir.5G229900 0.5kb upstream 0.5kb upstream 500 false Chr_05: 27803018-27803517 Setaria viridis
Sevir.5G229900 0.5kb downstream 0.5kb downstream 6960 true Chr_05: 27796058-27803017 Setaria viridis
Sevir.5G229900 0.5kb downstream 0.5kb downstream 500 false Chr_05: 27796058-27796557 Setaria viridis
Sevir.5G229900 1.0kb upstream 1.0kb upstream 7460 true Chr_05: 27796558-27804017 Setaria viridis
Sevir.5G229900 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 27803018-27804017 Setaria viridis
Sevir.5G229900 1.0kb downstream 1.0kb downstream 7460 true Chr_05: 27795558-27803017 Setaria viridis
Sevir.5G229900 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 27795558-27796557 Setaria viridis
Sevir.5G229900 2.0kb upstream 2.0kb upstream 8460 true Chr_05: 27796558-27805017 Setaria viridis
Sevir.5G229900 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 27803018-27805017 Setaria viridis
Sevir.5G229900 2.0kb downstream 2.0kb downstream 8460 true Chr_05: 27794558-27803017 Setaria viridis
Sevir.5G229900 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 27794558-27796557 Setaria viridis
Sevir.5G229900 5.0kb upstream 5.0kb upstream 11460 true Chr_05: 27796558-27808017 Setaria viridis
Sevir.5G229900 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 27803018-27808017 Setaria viridis
Sevir.5G229900 5.0kb downstream 5.0kb downstream 11460 true Chr_05: 27791558-27803017 Setaria viridis
Sevir.5G229900 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 27791558-27796557 Setaria viridis
Sevir.5G229900 10.0kb upstream 10.0kb upstream 16460 true Chr_05: 27796558-27813017 Setaria viridis
Sevir.5G229900 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 27803018-27813017 Setaria viridis
Sevir.5G229900 10.0kb downstream 10.0kb downstream 16460 true Chr_05: 27786558-27803017 Setaria viridis
Sevir.5G229900 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 27786558-27796557 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180775 5267 Panicoideae View MSA
124573185 5269 Grass View MSA
122041541 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain