Gene : Sevir.5G183400 S. viridis v2.1
Defline:  (1 of 1) PTHR11452//PTHR11452:SF14 - ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE // ALPHA-GALACTOSIDASE A Genomic Order:  2004
Name:  ? Sevir.5G183400 Secondary Identifier:  ? PAC:40631446
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY0-1301 Setaria viridis pathologic  
Sviridis PWY-6527 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G183400 0.5kb upstream 0.5kb upstream 7723 true Chr_05: 22276545-22284267 Setaria viridis
Sevir.5G183400 0.5kb upstream 0.5kb upstream 500 false Chr_05: 22283768-22284267 Setaria viridis
Sevir.5G183400 0.5kb downstream 0.5kb downstream 7723 true Chr_05: 22276045-22283767 Setaria viridis
Sevir.5G183400 0.5kb downstream 0.5kb downstream 500 false Chr_05: 22276045-22276544 Setaria viridis
Sevir.5G183400 1.0kb upstream 1.0kb upstream 8223 true Chr_05: 22276545-22284767 Setaria viridis
Sevir.5G183400 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 22283768-22284767 Setaria viridis
Sevir.5G183400 1.0kb downstream 1.0kb downstream 8223 true Chr_05: 22275545-22283767 Setaria viridis
Sevir.5G183400 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 22275545-22276544 Setaria viridis
Sevir.5G183400 2.0kb upstream 2.0kb upstream 9223 true Chr_05: 22276545-22285767 Setaria viridis
Sevir.5G183400 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 22283768-22285767 Setaria viridis
Sevir.5G183400 2.0kb downstream 2.0kb downstream 9223 true Chr_05: 22274545-22283767 Setaria viridis
Sevir.5G183400 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 22274545-22276544 Setaria viridis
Sevir.5G183400 5.0kb upstream 5.0kb upstream 12223 true Chr_05: 22276545-22288767 Setaria viridis
Sevir.5G183400 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 22283768-22288767 Setaria viridis
Sevir.5G183400 5.0kb downstream 5.0kb downstream 12223 true Chr_05: 22271545-22283767 Setaria viridis
Sevir.5G183400 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 22271545-22276544 Setaria viridis
Sevir.5G183400 10.0kb upstream 10.0kb upstream 17223 true Chr_05: 22276545-22293767 Setaria viridis
Sevir.5G183400 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 22283768-22293767 Setaria viridis
Sevir.5G183400 10.0kb downstream 10.0kb downstream 17223 true Chr_05: 22266545-22283767 Setaria viridis
Sevir.5G183400 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 22266545-22276544 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177014 5267 Panicoideae View MSA
124574217 5269 Grass View MSA
122043993 5273 Angiosperm View MSA
121347299 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain