Gene : Sevir.5G273300 S. viridis v2.1

Defline:  (1 of 1) K02968 - small subunit ribosomal protein S20 (RP-S20, rpsT) Genomic Order:  2957
Name:  ? Sevir.5G273300 Secondary Identifier:  ? PAC:40630935

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G273300 0.5kb upstream 0.5kb upstream 2741 true Chr_05: 32660905-32663645 Setaria viridis
Sevir.5G273300 0.5kb upstream 0.5kb upstream 500 false Chr_05: 32660905-32661404 Setaria viridis
Sevir.5G273300 0.5kb downstream 0.5kb downstream 2741 true Chr_05: 32661405-32664145 Setaria viridis
Sevir.5G273300 0.5kb downstream 0.5kb downstream 500 false Chr_05: 32663646-32664145 Setaria viridis
Sevir.5G273300 1.0kb upstream 1.0kb upstream 3241 true Chr_05: 32660405-32663645 Setaria viridis
Sevir.5G273300 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 32660405-32661404 Setaria viridis
Sevir.5G273300 1.0kb downstream 1.0kb downstream 3241 true Chr_05: 32661405-32664645 Setaria viridis
Sevir.5G273300 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 32663646-32664645 Setaria viridis
Sevir.5G273300 2.0kb upstream 2.0kb upstream 4241 true Chr_05: 32659405-32663645 Setaria viridis
Sevir.5G273300 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 32659405-32661404 Setaria viridis
Sevir.5G273300 2.0kb downstream 2.0kb downstream 4241 true Chr_05: 32661405-32665645 Setaria viridis
Sevir.5G273300 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 32663646-32665645 Setaria viridis
Sevir.5G273300 5.0kb upstream 5.0kb upstream 7241 true Chr_05: 32656405-32663645 Setaria viridis
Sevir.5G273300 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 32656405-32661404 Setaria viridis
Sevir.5G273300 5.0kb downstream 5.0kb downstream 7241 true Chr_05: 32661405-32668645 Setaria viridis
Sevir.5G273300 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 32663646-32668645 Setaria viridis
Sevir.5G273300 10.0kb upstream 10.0kb upstream 12241 true Chr_05: 32651405-32663645 Setaria viridis
Sevir.5G273300 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 32651405-32661404 Setaria viridis
Sevir.5G273300 10.0kb downstream 10.0kb downstream 12241 true Chr_05: 32661405-32673645 Setaria viridis
Sevir.5G273300 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 32663646-32673645 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027102 5273 Angiosperm View MSA
122189200 5267 Panicoideae View MSA
124572146 5269 Grass View MSA
121345926 5274 Embryophyte View MSA
123425445 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain