Gene : Sevir.5G199700 S. viridis v2.1
Defline:  (1 of 1) PTHR19353:SF28 - FATTY ACID/SPHINGOLIPID DESATURASE Genomic Order:  2172
Name:  ? Sevir.5G199700 Secondary Identifier:  ? PAC:40629678
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7601 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G199700 0.5kb upstream 0.5kb upstream 1913 true Chr_05: 24959609-24961521 Setaria viridis
Sevir.5G199700 0.5kb upstream 0.5kb upstream 500 false Chr_05: 24961022-24961521 Setaria viridis
Sevir.5G199700 0.5kb downstream 0.5kb downstream 1913 true Chr_05: 24959109-24961021 Setaria viridis
Sevir.5G199700 0.5kb downstream 0.5kb downstream 500 false Chr_05: 24959109-24959608 Setaria viridis
Sevir.5G199700 1.0kb upstream 1.0kb upstream 2413 true Chr_05: 24959609-24962021 Setaria viridis
Sevir.5G199700 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 24961022-24962021 Setaria viridis
Sevir.5G199700 1.0kb downstream 1.0kb downstream 2413 true Chr_05: 24958609-24961021 Setaria viridis
Sevir.5G199700 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 24958609-24959608 Setaria viridis
Sevir.5G199700 2.0kb upstream 2.0kb upstream 3413 true Chr_05: 24959609-24963021 Setaria viridis
Sevir.5G199700 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 24961022-24963021 Setaria viridis
Sevir.5G199700 2.0kb downstream 2.0kb downstream 3413 true Chr_05: 24957609-24961021 Setaria viridis
Sevir.5G199700 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 24957609-24959608 Setaria viridis
Sevir.5G199700 5.0kb upstream 5.0kb upstream 6413 true Chr_05: 24959609-24966021 Setaria viridis
Sevir.5G199700 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 24961022-24966021 Setaria viridis
Sevir.5G199700 5.0kb downstream 5.0kb downstream 6413 true Chr_05: 24954609-24961021 Setaria viridis
Sevir.5G199700 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 24954609-24959608 Setaria viridis
Sevir.5G199700 10.0kb upstream 10.0kb upstream 11413 true Chr_05: 24959609-24971021 Setaria viridis
Sevir.5G199700 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 24961022-24971021 Setaria viridis
Sevir.5G199700 10.0kb downstream 10.0kb downstream 11413 true Chr_05: 24949609-24961021 Setaria viridis
Sevir.5G199700 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 24949609-24959608 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047499 5273 Angiosperm View MSA
122192094 5267 Panicoideae View MSA
124466254 5269 Grass View MSA
121347259 5274 Embryophyte View MSA
123427370 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain