Gene : Sevir.5G134900 S. viridis v2.1
Defline:  (1 of 1) 2.1.1.190 - 23S rRNA (uracil(1939)-C(5))-methyltransferase / RNA uridine methyltransferase A Genomic Order:  1478
Name:  ? Sevir.5G134900 Secondary Identifier:  ? PAC:40632837
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G134900 0.5kb upstream 0.5kb upstream 10647 true Chr_05: 11419510-11430156 Setaria viridis
Sevir.5G134900 0.5kb upstream 0.5kb upstream 500 false Chr_05: 11429657-11430156 Setaria viridis
Sevir.5G134900 0.5kb downstream 0.5kb downstream 10647 true Chr_05: 11419010-11429656 Setaria viridis
Sevir.5G134900 0.5kb downstream 0.5kb downstream 500 false Chr_05: 11419010-11419509 Setaria viridis
Sevir.5G134900 1.0kb upstream 1.0kb upstream 11147 true Chr_05: 11419510-11430656 Setaria viridis
Sevir.5G134900 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 11429657-11430656 Setaria viridis
Sevir.5G134900 1.0kb downstream 1.0kb downstream 11147 true Chr_05: 11418510-11429656 Setaria viridis
Sevir.5G134900 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 11418510-11419509 Setaria viridis
Sevir.5G134900 2.0kb upstream 2.0kb upstream 12147 true Chr_05: 11419510-11431656 Setaria viridis
Sevir.5G134900 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 11429657-11431656 Setaria viridis
Sevir.5G134900 2.0kb downstream 2.0kb downstream 12147 true Chr_05: 11417510-11429656 Setaria viridis
Sevir.5G134900 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 11417510-11419509 Setaria viridis
Sevir.5G134900 5.0kb upstream 5.0kb upstream 15147 true Chr_05: 11419510-11434656 Setaria viridis
Sevir.5G134900 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 11429657-11434656 Setaria viridis
Sevir.5G134900 5.0kb downstream 5.0kb downstream 15147 true Chr_05: 11414510-11429656 Setaria viridis
Sevir.5G134900 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 11414510-11419509 Setaria viridis
Sevir.5G134900 10.0kb upstream 10.0kb upstream 20147 true Chr_05: 11419510-11439656 Setaria viridis
Sevir.5G134900 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 11429657-11439656 Setaria viridis
Sevir.5G134900 10.0kb downstream 10.0kb downstream 20147 true Chr_05: 11409510-11429656 Setaria viridis
Sevir.5G134900 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 11409510-11419509 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184855 5267 Panicoideae View MSA
124574182 5269 Grass View MSA
122042152 5273 Angiosperm View MSA
121345091 5274 Embryophyte View MSA
123424748 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain