Gene : Sevir.5G130800 S. viridis v2.1
Defline:  (1 of 8) PF13426 - PAS domain (PAS_9) Genomic Order:  1425
Name:  ? Sevir.5G130800 Secondary Identifier:  ? PAC:40629869
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G130800 0.5kb upstream 0.5kb upstream 4554 true Chr_05: 10823460-10828013 Setaria viridis
Sevir.5G130800 0.5kb upstream 0.5kb upstream 500 false Chr_05: 10827514-10828013 Setaria viridis
Sevir.5G130800 0.5kb downstream 0.5kb downstream 4554 true Chr_05: 10822960-10827513 Setaria viridis
Sevir.5G130800 0.5kb downstream 0.5kb downstream 500 false Chr_05: 10822960-10823459 Setaria viridis
Sevir.5G130800 1.0kb upstream 1.0kb upstream 5054 true Chr_05: 10823460-10828513 Setaria viridis
Sevir.5G130800 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 10827514-10828513 Setaria viridis
Sevir.5G130800 1.0kb downstream 1.0kb downstream 5054 true Chr_05: 10822460-10827513 Setaria viridis
Sevir.5G130800 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 10822460-10823459 Setaria viridis
Sevir.5G130800 2.0kb upstream 2.0kb upstream 6054 true Chr_05: 10823460-10829513 Setaria viridis
Sevir.5G130800 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 10827514-10829513 Setaria viridis
Sevir.5G130800 2.0kb downstream 2.0kb downstream 6054 true Chr_05: 10821460-10827513 Setaria viridis
Sevir.5G130800 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 10821460-10823459 Setaria viridis
Sevir.5G130800 5.0kb upstream 5.0kb upstream 9054 true Chr_05: 10823460-10832513 Setaria viridis
Sevir.5G130800 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 10827514-10832513 Setaria viridis
Sevir.5G130800 5.0kb downstream 5.0kb downstream 9054 true Chr_05: 10818460-10827513 Setaria viridis
Sevir.5G130800 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 10818460-10823459 Setaria viridis
Sevir.5G130800 10.0kb upstream 10.0kb upstream 14054 true Chr_05: 10823460-10837513 Setaria viridis
Sevir.5G130800 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 10827514-10837513 Setaria viridis
Sevir.5G130800 10.0kb downstream 10.0kb downstream 14054 true Chr_05: 10813460-10827513 Setaria viridis
Sevir.5G130800 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 10813460-10823459 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179675 5267 Panicoideae View MSA
124576216 5269 Grass View MSA
122045856 5273 Angiosperm View MSA
121348460 5274 Embryophyte View MSA
123424929 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain