Gene : Sevir.5G109800 S. viridis v2.1
Defline:  (1 of 3) PTHR10909//PTHR10909:SF331 - ELECTRON TRANSPORT OXIDOREDUCTASE // ACYL-COENZYME A OXIDASE 4, PEROXISOMAL Genomic Order:  1206
Name:  ? Sevir.5G109800 Secondary Identifier:  ? PAC:40634206
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5136 Setaria viridis pathologic  
Sviridis PWY-561 Setaria viridis pathologic  
Sviridis PWY-6837 Setaria viridis pathologic  
Sviridis PWY-735 Setaria viridis pathologic  
Sviridis PWY-7606 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G109800 0.5kb upstream 0.5kb upstream 5211 true Chr_05: 8831996-8837206 Setaria viridis
Sevir.5G109800 0.5kb upstream 0.5kb upstream 500 false Chr_05: 8836707-8837206 Setaria viridis
Sevir.5G109800 0.5kb downstream 0.5kb downstream 5211 true Chr_05: 8831496-8836706 Setaria viridis
Sevir.5G109800 0.5kb downstream 0.5kb downstream 500 false Chr_05: 8831496-8831995 Setaria viridis
Sevir.5G109800 1.0kb upstream 1.0kb upstream 5711 true Chr_05: 8831996-8837706 Setaria viridis
Sevir.5G109800 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 8836707-8837706 Setaria viridis
Sevir.5G109800 1.0kb downstream 1.0kb downstream 5711 true Chr_05: 8830996-8836706 Setaria viridis
Sevir.5G109800 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 8830996-8831995 Setaria viridis
Sevir.5G109800 2.0kb upstream 2.0kb upstream 6711 true Chr_05: 8831996-8838706 Setaria viridis
Sevir.5G109800 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 8836707-8838706 Setaria viridis
Sevir.5G109800 2.0kb downstream 2.0kb downstream 6711 true Chr_05: 8829996-8836706 Setaria viridis
Sevir.5G109800 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 8829996-8831995 Setaria viridis
Sevir.5G109800 5.0kb upstream 5.0kb upstream 9711 true Chr_05: 8831996-8841706 Setaria viridis
Sevir.5G109800 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 8836707-8841706 Setaria viridis
Sevir.5G109800 5.0kb downstream 5.0kb downstream 9711 true Chr_05: 8826996-8836706 Setaria viridis
Sevir.5G109800 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 8826996-8831995 Setaria viridis
Sevir.5G109800 10.0kb upstream 10.0kb upstream 14711 true Chr_05: 8831996-8846706 Setaria viridis
Sevir.5G109800 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 8836707-8846706 Setaria viridis
Sevir.5G109800 10.0kb downstream 10.0kb downstream 14711 true Chr_05: 8821996-8836706 Setaria viridis
Sevir.5G109800 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 8821996-8831995 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190295 5267 Panicoideae View MSA
124573207 5269 Grass View MSA
122043325 5273 Angiosperm View MSA
121347950 5274 Embryophyte View MSA
123424845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain