Gene : Sevir.5G163400 S. viridis v2.1
Defline:  (1 of 1) PTHR13622//PTHR13622:SF6 - THIAMIN PYROPHOSPHOKINASE // SUBFAMILY NOT NAMED Genomic Order:  1783
Name:  ? Sevir.5G163400 Secondary Identifier:  ? PAC:40629985
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-6908 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G163400 0.5kb upstream 0.5kb upstream 6553 true Chr_05: 15577448-15584000 Setaria viridis
Sevir.5G163400 0.5kb upstream 0.5kb upstream 500 false Chr_05: 15583501-15584000 Setaria viridis
Sevir.5G163400 0.5kb downstream 0.5kb downstream 6553 true Chr_05: 15576948-15583500 Setaria viridis
Sevir.5G163400 0.5kb downstream 0.5kb downstream 500 false Chr_05: 15576948-15577447 Setaria viridis
Sevir.5G163400 1.0kb upstream 1.0kb upstream 7053 true Chr_05: 15577448-15584500 Setaria viridis
Sevir.5G163400 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 15583501-15584500 Setaria viridis
Sevir.5G163400 1.0kb downstream 1.0kb downstream 7053 true Chr_05: 15576448-15583500 Setaria viridis
Sevir.5G163400 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 15576448-15577447 Setaria viridis
Sevir.5G163400 2.0kb upstream 2.0kb upstream 8053 true Chr_05: 15577448-15585500 Setaria viridis
Sevir.5G163400 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 15583501-15585500 Setaria viridis
Sevir.5G163400 2.0kb downstream 2.0kb downstream 8053 true Chr_05: 15575448-15583500 Setaria viridis
Sevir.5G163400 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 15575448-15577447 Setaria viridis
Sevir.5G163400 5.0kb upstream 5.0kb upstream 11053 true Chr_05: 15577448-15588500 Setaria viridis
Sevir.5G163400 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 15583501-15588500 Setaria viridis
Sevir.5G163400 5.0kb downstream 5.0kb downstream 11053 true Chr_05: 15572448-15583500 Setaria viridis
Sevir.5G163400 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 15572448-15577447 Setaria viridis
Sevir.5G163400 10.0kb upstream 10.0kb upstream 16053 true Chr_05: 15577448-15593500 Setaria viridis
Sevir.5G163400 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 15583501-15593500 Setaria viridis
Sevir.5G163400 10.0kb downstream 10.0kb downstream 16053 true Chr_05: 15567448-15583500 Setaria viridis
Sevir.5G163400 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 15567448-15577447 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189565 5267 Panicoideae View MSA
124575442 5269 Grass View MSA
122046316 5273 Angiosperm View MSA
121345006 5274 Embryophyte View MSA
123424730 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain