Gene : Sevir.5G153100 S. viridis v2.1
Defline:  (1 of 1) PTHR13495//PTHR13495:SF0 - NEFA-INTERACTING NUCLEAR PROTEIN NIP30 // PROTEIN FAM192A Genomic Order:  1677
Name:  ? Sevir.5G153100 Secondary Identifier:  ? PAC:40635252
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G153100 0.5kb upstream 0.5kb upstream 5563 true Chr_05: 13488976-13494538 Setaria viridis
Sevir.5G153100 0.5kb upstream 0.5kb upstream 500 false Chr_05: 13488976-13489475 Setaria viridis
Sevir.5G153100 0.5kb downstream 0.5kb downstream 5563 true Chr_05: 13489476-13495038 Setaria viridis
Sevir.5G153100 0.5kb downstream 0.5kb downstream 500 false Chr_05: 13494539-13495038 Setaria viridis
Sevir.5G153100 1.0kb upstream 1.0kb upstream 6063 true Chr_05: 13488476-13494538 Setaria viridis
Sevir.5G153100 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 13488476-13489475 Setaria viridis
Sevir.5G153100 1.0kb downstream 1.0kb downstream 6063 true Chr_05: 13489476-13495538 Setaria viridis
Sevir.5G153100 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 13494539-13495538 Setaria viridis
Sevir.5G153100 2.0kb upstream 2.0kb upstream 7063 true Chr_05: 13487476-13494538 Setaria viridis
Sevir.5G153100 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 13487476-13489475 Setaria viridis
Sevir.5G153100 2.0kb downstream 2.0kb downstream 7063 true Chr_05: 13489476-13496538 Setaria viridis
Sevir.5G153100 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 13494539-13496538 Setaria viridis
Sevir.5G153100 5.0kb upstream 5.0kb upstream 10063 true Chr_05: 13484476-13494538 Setaria viridis
Sevir.5G153100 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 13484476-13489475 Setaria viridis
Sevir.5G153100 5.0kb downstream 5.0kb downstream 10063 true Chr_05: 13489476-13499538 Setaria viridis
Sevir.5G153100 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 13494539-13499538 Setaria viridis
Sevir.5G153100 10.0kb upstream 10.0kb upstream 15063 true Chr_05: 13479476-13494538 Setaria viridis
Sevir.5G153100 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 13479476-13489475 Setaria viridis
Sevir.5G153100 10.0kb downstream 10.0kb downstream 15063 true Chr_05: 13489476-13504538 Setaria viridis
Sevir.5G153100 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 13494539-13504538 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175281 5267 Panicoideae View MSA
124569896 5269 Grass View MSA
122047119 5273 Angiosperm View MSA
121346332 5274 Embryophyte View MSA
123425229 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain