Gene : Sevir.5G085200 S. viridis v2.1
Defline:  (1 of 2) 5.3.1.8 - Mannose-6-phosphate isomerase / Phosphomannose isomerase Genomic Order:  927
Name:  ? Sevir.5G085200 Secondary Identifier:  ? PAC:40634895
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis MANNCAT-PWY Setaria viridis pathologic  
Sviridis PWY-3881 Setaria viridis pathologic  
Sviridis PWY-5659 Setaria viridis pathologic  
Sviridis PWY-882 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G085200 0.5kb upstream 0.5kb upstream 7522 true Chr_05: 6822159-6829680 Setaria viridis
Sevir.5G085200 0.5kb upstream 0.5kb upstream 500 false Chr_05: 6822159-6822658 Setaria viridis
Sevir.5G085200 0.5kb downstream 0.5kb downstream 7522 true Chr_05: 6822659-6830180 Setaria viridis
Sevir.5G085200 0.5kb downstream 0.5kb downstream 500 false Chr_05: 6829681-6830180 Setaria viridis
Sevir.5G085200 1.0kb upstream 1.0kb upstream 8022 true Chr_05: 6821659-6829680 Setaria viridis
Sevir.5G085200 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 6821659-6822658 Setaria viridis
Sevir.5G085200 1.0kb downstream 1.0kb downstream 8022 true Chr_05: 6822659-6830680 Setaria viridis
Sevir.5G085200 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 6829681-6830680 Setaria viridis
Sevir.5G085200 2.0kb upstream 2.0kb upstream 9022 true Chr_05: 6820659-6829680 Setaria viridis
Sevir.5G085200 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 6820659-6822658 Setaria viridis
Sevir.5G085200 2.0kb downstream 2.0kb downstream 9022 true Chr_05: 6822659-6831680 Setaria viridis
Sevir.5G085200 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 6829681-6831680 Setaria viridis
Sevir.5G085200 5.0kb upstream 5.0kb upstream 12022 true Chr_05: 6817659-6829680 Setaria viridis
Sevir.5G085200 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 6817659-6822658 Setaria viridis
Sevir.5G085200 5.0kb downstream 5.0kb downstream 12022 true Chr_05: 6822659-6834680 Setaria viridis
Sevir.5G085200 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 6829681-6834680 Setaria viridis
Sevir.5G085200 10.0kb upstream 10.0kb upstream 17022 true Chr_05: 6812659-6829680 Setaria viridis
Sevir.5G085200 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 6812659-6822658 Setaria viridis
Sevir.5G085200 10.0kb downstream 10.0kb downstream 17022 true Chr_05: 6822659-6839680 Setaria viridis
Sevir.5G085200 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 6829681-6839680 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187972 5267 Panicoideae View MSA
124568309 5269 Grass View MSA
122046941 5273 Angiosperm View MSA
121350841 5274 Embryophyte View MSA
123423837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain