Gene : Sevir.5G055400 S. viridis v2.1
Defline:  (1 of 1) PTHR23293:SF9 - FAD SYNTHASE Genomic Order:  603
Name:  ? Sevir.5G055400 Secondary Identifier:  ? PAC:40629006
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis RIBOSYN2-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G055400 0.5kb upstream 0.5kb upstream 6893 true Chr_05: 4372954-4379846 Setaria viridis
Sevir.5G055400 0.5kb upstream 0.5kb upstream 500 false Chr_05: 4372954-4373453 Setaria viridis
Sevir.5G055400 0.5kb downstream 0.5kb downstream 6893 true Chr_05: 4373454-4380346 Setaria viridis
Sevir.5G055400 0.5kb downstream 0.5kb downstream 500 false Chr_05: 4379847-4380346 Setaria viridis
Sevir.5G055400 1.0kb upstream 1.0kb upstream 7393 true Chr_05: 4372454-4379846 Setaria viridis
Sevir.5G055400 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 4372454-4373453 Setaria viridis
Sevir.5G055400 1.0kb downstream 1.0kb downstream 7393 true Chr_05: 4373454-4380846 Setaria viridis
Sevir.5G055400 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 4379847-4380846 Setaria viridis
Sevir.5G055400 2.0kb upstream 2.0kb upstream 8393 true Chr_05: 4371454-4379846 Setaria viridis
Sevir.5G055400 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 4371454-4373453 Setaria viridis
Sevir.5G055400 2.0kb downstream 2.0kb downstream 8393 true Chr_05: 4373454-4381846 Setaria viridis
Sevir.5G055400 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 4379847-4381846 Setaria viridis
Sevir.5G055400 5.0kb upstream 5.0kb upstream 11393 true Chr_05: 4368454-4379846 Setaria viridis
Sevir.5G055400 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 4368454-4373453 Setaria viridis
Sevir.5G055400 5.0kb downstream 5.0kb downstream 11393 true Chr_05: 4373454-4384846 Setaria viridis
Sevir.5G055400 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 4379847-4384846 Setaria viridis
Sevir.5G055400 10.0kb upstream 10.0kb upstream 16393 true Chr_05: 4363454-4379846 Setaria viridis
Sevir.5G055400 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 4363454-4373453 Setaria viridis
Sevir.5G055400 10.0kb downstream 10.0kb downstream 16393 true Chr_05: 4373454-4389846 Setaria viridis
Sevir.5G055400 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 4379847-4389846 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184115 5267 Panicoideae View MSA
124580685 5269 Grass View MSA
122049798 5273 Angiosperm View MSA
121344639 5274 Embryophyte View MSA
123427825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain