Gene : Sevir.2G364000 S. viridis v2.1
Defline:  (1 of 2) K04718 - sphingosine kinase (SPHK) Genomic Order:  3975
Name:  ? Sevir.2G364000 Secondary Identifier:  ? PAC:40622514
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5129 Setaria viridis pathologic  
Sviridis PWY-6483 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.2G364000 0.5kb upstream 0.5kb upstream 4982 true Chr_02: 42064064-42069045 Setaria viridis
Sevir.2G364000 0.5kb upstream 0.5kb upstream 500 false Chr_02: 42064064-42064563 Setaria viridis
Sevir.2G364000 0.5kb downstream 0.5kb downstream 4982 true Chr_02: 42064564-42069545 Setaria viridis
Sevir.2G364000 0.5kb downstream 0.5kb downstream 500 false Chr_02: 42069046-42069545 Setaria viridis
Sevir.2G364000 1.0kb upstream 1.0kb upstream 5482 true Chr_02: 42063564-42069045 Setaria viridis
Sevir.2G364000 1.0kb upstream 1.0kb upstream 1000 false Chr_02: 42063564-42064563 Setaria viridis
Sevir.2G364000 1.0kb downstream 1.0kb downstream 5482 true Chr_02: 42064564-42070045 Setaria viridis
Sevir.2G364000 1.0kb downstream 1.0kb downstream 1000 false Chr_02: 42069046-42070045 Setaria viridis
Sevir.2G364000 2.0kb upstream 2.0kb upstream 6482 true Chr_02: 42062564-42069045 Setaria viridis
Sevir.2G364000 2.0kb upstream 2.0kb upstream 2000 false Chr_02: 42062564-42064563 Setaria viridis
Sevir.2G364000 2.0kb downstream 2.0kb downstream 6482 true Chr_02: 42064564-42071045 Setaria viridis
Sevir.2G364000 2.0kb downstream 2.0kb downstream 2000 false Chr_02: 42069046-42071045 Setaria viridis
Sevir.2G364000 5.0kb upstream 5.0kb upstream 9482 true Chr_02: 42059564-42069045 Setaria viridis
Sevir.2G364000 5.0kb upstream 5.0kb upstream 5000 false Chr_02: 42059564-42064563 Setaria viridis
Sevir.2G364000 5.0kb downstream 5.0kb downstream 9482 true Chr_02: 42064564-42074045 Setaria viridis
Sevir.2G364000 5.0kb downstream 5.0kb downstream 5000 false Chr_02: 42069046-42074045 Setaria viridis
Sevir.2G364000 10.0kb upstream 10.0kb upstream 14482 true Chr_02: 42054564-42069045 Setaria viridis
Sevir.2G364000 10.0kb upstream 10.0kb upstream 10000 false Chr_02: 42054564-42064563 Setaria viridis
Sevir.2G364000 10.0kb downstream 10.0kb downstream 14482 true Chr_02: 42064564-42079045 Setaria viridis
Sevir.2G364000 10.0kb downstream 10.0kb downstream 10000 false Chr_02: 42069046-42079045 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184562 5267 Panicoideae View MSA
124586280 5269 Grass View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain