Gene : Sevir.2G196500 S. viridis v2.1
Defline:  (1 of 1) PTHR11921//PTHR11921:SF23 - SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN // SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT 3, MITOCHONDRIAL Genomic Order:  2139
Name:  ? Sevir.2G196500 Secondary Identifier:  ? PAC:40624117
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-3781 Setaria viridis pathologic  
Sviridis PWY-4302 Setaria viridis pathologic  
Sviridis PWY-5464 Setaria viridis pathologic  
Sviridis PWY-561 Setaria viridis pathologic  
Sviridis PWY-5690 Setaria viridis pathologic  
Sviridis PWY-7279 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.2G196500 0.5kb upstream 0.5kb upstream 1901 true Chr_02: 27364302-27366202 Setaria viridis
Sevir.2G196500 0.5kb upstream 0.5kb upstream 500 false Chr_02: 27365703-27366202 Setaria viridis
Sevir.2G196500 0.5kb downstream 0.5kb downstream 1901 true Chr_02: 27363802-27365702 Setaria viridis
Sevir.2G196500 0.5kb downstream 0.5kb downstream 500 false Chr_02: 27363802-27364301 Setaria viridis
Sevir.2G196500 1.0kb upstream 1.0kb upstream 2401 true Chr_02: 27364302-27366702 Setaria viridis
Sevir.2G196500 1.0kb upstream 1.0kb upstream 1000 false Chr_02: 27365703-27366702 Setaria viridis
Sevir.2G196500 1.0kb downstream 1.0kb downstream 2401 true Chr_02: 27363302-27365702 Setaria viridis
Sevir.2G196500 1.0kb downstream 1.0kb downstream 1000 false Chr_02: 27363302-27364301 Setaria viridis
Sevir.2G196500 2.0kb upstream 2.0kb upstream 3401 true Chr_02: 27364302-27367702 Setaria viridis
Sevir.2G196500 2.0kb upstream 2.0kb upstream 2000 false Chr_02: 27365703-27367702 Setaria viridis
Sevir.2G196500 2.0kb downstream 2.0kb downstream 3401 true Chr_02: 27362302-27365702 Setaria viridis
Sevir.2G196500 2.0kb downstream 2.0kb downstream 2000 false Chr_02: 27362302-27364301 Setaria viridis
Sevir.2G196500 5.0kb upstream 5.0kb upstream 6401 true Chr_02: 27364302-27370702 Setaria viridis
Sevir.2G196500 5.0kb upstream 5.0kb upstream 5000 false Chr_02: 27365703-27370702 Setaria viridis
Sevir.2G196500 5.0kb downstream 5.0kb downstream 6401 true Chr_02: 27359302-27365702 Setaria viridis
Sevir.2G196500 5.0kb downstream 5.0kb downstream 5000 false Chr_02: 27359302-27364301 Setaria viridis
Sevir.2G196500 10.0kb upstream 10.0kb upstream 11401 true Chr_02: 27364302-27375702 Setaria viridis
Sevir.2G196500 10.0kb upstream 10.0kb upstream 10000 false Chr_02: 27365703-27375702 Setaria viridis
Sevir.2G196500 10.0kb downstream 10.0kb downstream 11401 true Chr_02: 27354302-27365702 Setaria viridis
Sevir.2G196500 10.0kb downstream 10.0kb downstream 10000 false Chr_02: 27354302-27364301 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190340 5267 Panicoideae View MSA
124581738 5269 Grass View MSA
122049105 5273 Angiosperm View MSA
121351479 5274 Embryophyte View MSA
123424532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain