Gene : Sevir.2G168700 S. viridis v2.1
Defline:  (1 of 2) PTHR11452//PTHR11452:SF32 - ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE // SUBFAMILY NOT NAMED Genomic Order:  1838
Name:  ? Sevir.2G168700 Secondary Identifier:  ? PAC:40625367
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY0-1301 Setaria viridis pathologic  
Sviridis PWY-6527 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.2G168700 0.5kb upstream 0.5kb upstream 4314 true Chr_02: 23155840-23160153 Setaria viridis
Sevir.2G168700 0.5kb upstream 0.5kb upstream 500 false Chr_02: 23159654-23160153 Setaria viridis
Sevir.2G168700 0.5kb downstream 0.5kb downstream 4314 true Chr_02: 23155340-23159653 Setaria viridis
Sevir.2G168700 0.5kb downstream 0.5kb downstream 500 false Chr_02: 23155340-23155839 Setaria viridis
Sevir.2G168700 1.0kb upstream 1.0kb upstream 4814 true Chr_02: 23155840-23160653 Setaria viridis
Sevir.2G168700 1.0kb upstream 1.0kb upstream 1000 false Chr_02: 23159654-23160653 Setaria viridis
Sevir.2G168700 1.0kb downstream 1.0kb downstream 4814 true Chr_02: 23154840-23159653 Setaria viridis
Sevir.2G168700 1.0kb downstream 1.0kb downstream 1000 false Chr_02: 23154840-23155839 Setaria viridis
Sevir.2G168700 2.0kb upstream 2.0kb upstream 5814 true Chr_02: 23155840-23161653 Setaria viridis
Sevir.2G168700 2.0kb upstream 2.0kb upstream 2000 false Chr_02: 23159654-23161653 Setaria viridis
Sevir.2G168700 2.0kb downstream 2.0kb downstream 5814 true Chr_02: 23153840-23159653 Setaria viridis
Sevir.2G168700 2.0kb downstream 2.0kb downstream 2000 false Chr_02: 23153840-23155839 Setaria viridis
Sevir.2G168700 5.0kb upstream 5.0kb upstream 8814 true Chr_02: 23155840-23164653 Setaria viridis
Sevir.2G168700 5.0kb upstream 5.0kb upstream 5000 false Chr_02: 23159654-23164653 Setaria viridis
Sevir.2G168700 5.0kb downstream 5.0kb downstream 8814 true Chr_02: 23150840-23159653 Setaria viridis
Sevir.2G168700 5.0kb downstream 5.0kb downstream 5000 false Chr_02: 23150840-23155839 Setaria viridis
Sevir.2G168700 10.0kb upstream 10.0kb upstream 13814 true Chr_02: 23155840-23169653 Setaria viridis
Sevir.2G168700 10.0kb upstream 10.0kb upstream 10000 false Chr_02: 23159654-23169653 Setaria viridis
Sevir.2G168700 10.0kb downstream 10.0kb downstream 13814 true Chr_02: 23145840-23159653 Setaria viridis
Sevir.2G168700 10.0kb downstream 10.0kb downstream 10000 false Chr_02: 23145840-23155839 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192526 5267 Panicoideae View MSA
124466351 5269 Grass View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain