Gene : Sevir.2G070900 S. viridis v2.1
Defline:  (1 of 3) 2.2.1.7 - 1-deoxy-D-xylulose-5-phosphate synthase / DXP-synthase Genomic Order:  790
Name:  ? Sevir.2G070900 Secondary Identifier:  ? PAC:40625671
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7560 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.2G070900 0.5kb upstream 0.5kb upstream 4321 true Chr_02: 5885062-5889382 Setaria viridis
Sevir.2G070900 0.5kb upstream 0.5kb upstream 500 false Chr_02: 5885062-5885561 Setaria viridis
Sevir.2G070900 0.5kb downstream 0.5kb downstream 4321 true Chr_02: 5885562-5889882 Setaria viridis
Sevir.2G070900 0.5kb downstream 0.5kb downstream 500 false Chr_02: 5889383-5889882 Setaria viridis
Sevir.2G070900 1.0kb upstream 1.0kb upstream 4821 true Chr_02: 5884562-5889382 Setaria viridis
Sevir.2G070900 1.0kb upstream 1.0kb upstream 1000 false Chr_02: 5884562-5885561 Setaria viridis
Sevir.2G070900 1.0kb downstream 1.0kb downstream 4821 true Chr_02: 5885562-5890382 Setaria viridis
Sevir.2G070900 1.0kb downstream 1.0kb downstream 1000 false Chr_02: 5889383-5890382 Setaria viridis
Sevir.2G070900 2.0kb upstream 2.0kb upstream 5821 true Chr_02: 5883562-5889382 Setaria viridis
Sevir.2G070900 2.0kb upstream 2.0kb upstream 2000 false Chr_02: 5883562-5885561 Setaria viridis
Sevir.2G070900 2.0kb downstream 2.0kb downstream 5821 true Chr_02: 5885562-5891382 Setaria viridis
Sevir.2G070900 2.0kb downstream 2.0kb downstream 2000 false Chr_02: 5889383-5891382 Setaria viridis
Sevir.2G070900 5.0kb upstream 5.0kb upstream 8821 true Chr_02: 5880562-5889382 Setaria viridis
Sevir.2G070900 5.0kb upstream 5.0kb upstream 5000 false Chr_02: 5880562-5885561 Setaria viridis
Sevir.2G070900 5.0kb downstream 5.0kb downstream 8821 true Chr_02: 5885562-5894382 Setaria viridis
Sevir.2G070900 5.0kb downstream 5.0kb downstream 5000 false Chr_02: 5889383-5894382 Setaria viridis
Sevir.2G070900 10.0kb upstream 10.0kb upstream 13821 true Chr_02: 5875562-5889382 Setaria viridis
Sevir.2G070900 10.0kb upstream 10.0kb upstream 10000 false Chr_02: 5875562-5885561 Setaria viridis
Sevir.2G070900 10.0kb downstream 10.0kb downstream 13821 true Chr_02: 5885562-5899382 Setaria viridis
Sevir.2G070900 10.0kb downstream 10.0kb downstream 10000 false Chr_02: 5889383-5899382 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180882 5267 Panicoideae View MSA
124583726 5269 Grass View MSA
122048955 5273 Angiosperm View MSA
121351194 5274 Embryophyte View MSA
123428527 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain