Gene : Sevir.2G050300 S. viridis v2.1
Defline:  (1 of 1) K00167 - 2-oxoisovalerate dehydrogenase E1 component beta subunit (BCKDHB, bkdA2) Genomic Order:  564
Name:  ? Sevir.2G050300 Secondary Identifier:  ? PAC:40623072
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5046 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.2G050300 0.5kb upstream 0.5kb upstream 4661 true Chr_02: 4083987-4088647 Setaria viridis
Sevir.2G050300 0.5kb upstream 0.5kb upstream 500 false Chr_02: 4088148-4088647 Setaria viridis
Sevir.2G050300 0.5kb downstream 0.5kb downstream 4661 true Chr_02: 4083487-4088147 Setaria viridis
Sevir.2G050300 0.5kb downstream 0.5kb downstream 500 false Chr_02: 4083487-4083986 Setaria viridis
Sevir.2G050300 1.0kb upstream 1.0kb upstream 5161 true Chr_02: 4083987-4089147 Setaria viridis
Sevir.2G050300 1.0kb upstream 1.0kb upstream 1000 false Chr_02: 4088148-4089147 Setaria viridis
Sevir.2G050300 1.0kb downstream 1.0kb downstream 5161 true Chr_02: 4082987-4088147 Setaria viridis
Sevir.2G050300 1.0kb downstream 1.0kb downstream 1000 false Chr_02: 4082987-4083986 Setaria viridis
Sevir.2G050300 2.0kb upstream 2.0kb upstream 6161 true Chr_02: 4083987-4090147 Setaria viridis
Sevir.2G050300 2.0kb upstream 2.0kb upstream 2000 false Chr_02: 4088148-4090147 Setaria viridis
Sevir.2G050300 2.0kb downstream 2.0kb downstream 6161 true Chr_02: 4081987-4088147 Setaria viridis
Sevir.2G050300 2.0kb downstream 2.0kb downstream 2000 false Chr_02: 4081987-4083986 Setaria viridis
Sevir.2G050300 5.0kb upstream 5.0kb upstream 9161 true Chr_02: 4083987-4093147 Setaria viridis
Sevir.2G050300 5.0kb upstream 5.0kb upstream 5000 false Chr_02: 4088148-4093147 Setaria viridis
Sevir.2G050300 5.0kb downstream 5.0kb downstream 9161 true Chr_02: 4078987-4088147 Setaria viridis
Sevir.2G050300 5.0kb downstream 5.0kb downstream 5000 false Chr_02: 4078987-4083986 Setaria viridis
Sevir.2G050300 10.0kb upstream 10.0kb upstream 14161 true Chr_02: 4083987-4098147 Setaria viridis
Sevir.2G050300 10.0kb upstream 10.0kb upstream 10000 false Chr_02: 4088148-4098147 Setaria viridis
Sevir.2G050300 10.0kb downstream 10.0kb downstream 14161 true Chr_02: 4073987-4088147 Setaria viridis
Sevir.2G050300 10.0kb downstream 10.0kb downstream 10000 false Chr_02: 4073987-4083986 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195911 5267 Panicoideae View MSA
124570574 5269 Grass View MSA
122046166 5273 Angiosperm View MSA
121344271 5274 Embryophyte View MSA
123424966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain