Gene : Sevir.9G563000 S. viridis v2.1
Defline:  (1 of 2) PTHR12358//PTHR12358:SF43 - SPHINGOSINE KINASE // SPHINGOID LONG-CHAIN BASES KINASE 2, MITOCHONDRIAL Genomic Order:  6146
Name:  ? Sevir.9G563000 Secondary Identifier:  ? PAC:40616484
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7039 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G563000 0.5kb upstream 0.5kb upstream 4297 true Chr_09: 54975834-54980130 Setaria viridis
Sevir.9G563000 0.5kb upstream 0.5kb upstream 500 false Chr_09: 54979631-54980130 Setaria viridis
Sevir.9G563000 0.5kb downstream 0.5kb downstream 4297 true Chr_09: 54975334-54979630 Setaria viridis
Sevir.9G563000 0.5kb downstream 0.5kb downstream 500 false Chr_09: 54975334-54975833 Setaria viridis
Sevir.9G563000 1.0kb upstream 1.0kb upstream 4797 true Chr_09: 54975834-54980630 Setaria viridis
Sevir.9G563000 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 54979631-54980630 Setaria viridis
Sevir.9G563000 1.0kb downstream 1.0kb downstream 4797 true Chr_09: 54974834-54979630 Setaria viridis
Sevir.9G563000 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 54974834-54975833 Setaria viridis
Sevir.9G563000 2.0kb upstream 2.0kb upstream 5797 true Chr_09: 54975834-54981630 Setaria viridis
Sevir.9G563000 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 54979631-54981630 Setaria viridis
Sevir.9G563000 2.0kb downstream 2.0kb downstream 5797 true Chr_09: 54973834-54979630 Setaria viridis
Sevir.9G563000 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 54973834-54975833 Setaria viridis
Sevir.9G563000 5.0kb upstream 5.0kb upstream 8797 true Chr_09: 54975834-54984630 Setaria viridis
Sevir.9G563000 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 54979631-54984630 Setaria viridis
Sevir.9G563000 5.0kb downstream 5.0kb downstream 8797 true Chr_09: 54970834-54979630 Setaria viridis
Sevir.9G563000 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 54970834-54975833 Setaria viridis
Sevir.9G563000 10.0kb upstream 10.0kb upstream 13797 true Chr_09: 54975834-54989630 Setaria viridis
Sevir.9G563000 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 54979631-54989630 Setaria viridis
Sevir.9G563000 10.0kb downstream 10.0kb downstream 13797 true Chr_09: 54965834-54979630 Setaria viridis
Sevir.9G563000 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 54965834-54975833 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197669 5267 Panicoideae View MSA
124573457 5269 Grass View MSA
122043667 5273 Angiosperm View MSA
121344203 5274 Embryophyte View MSA
123380000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain