Gene : Sevir.9G552600 S. viridis v2.1
Defline:  (1 of 2) K01681 - aconitate hydratase (ACO, acnA) Genomic Order:  6034
Name:  ? Sevir.9G552600 Secondary Identifier:  ? PAC:40610726
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis GLYOXYLATE-BYPASS Setaria viridis pathologic  
Sviridis PWY-5464 Setaria viridis pathologic  
Sviridis PWY-561 Setaria viridis pathologic  
Sviridis PWY-5690 Setaria viridis pathologic  
Sviridis PWY-6549 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G552600 0.5kb upstream 0.5kb upstream 7742 true Chr_09: 54285591-54293332 Setaria viridis
Sevir.9G552600 0.5kb upstream 0.5kb upstream 500 false Chr_09: 54285591-54286090 Setaria viridis
Sevir.9G552600 0.5kb downstream 0.5kb downstream 7742 true Chr_09: 54286091-54293832 Setaria viridis
Sevir.9G552600 0.5kb downstream 0.5kb downstream 500 false Chr_09: 54293333-54293832 Setaria viridis
Sevir.9G552600 1.0kb upstream 1.0kb upstream 8242 true Chr_09: 54285091-54293332 Setaria viridis
Sevir.9G552600 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 54285091-54286090 Setaria viridis
Sevir.9G552600 1.0kb downstream 1.0kb downstream 8242 true Chr_09: 54286091-54294332 Setaria viridis
Sevir.9G552600 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 54293333-54294332 Setaria viridis
Sevir.9G552600 2.0kb upstream 2.0kb upstream 9242 true Chr_09: 54284091-54293332 Setaria viridis
Sevir.9G552600 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 54284091-54286090 Setaria viridis
Sevir.9G552600 2.0kb downstream 2.0kb downstream 9242 true Chr_09: 54286091-54295332 Setaria viridis
Sevir.9G552600 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 54293333-54295332 Setaria viridis
Sevir.9G552600 5.0kb upstream 5.0kb upstream 12242 true Chr_09: 54281091-54293332 Setaria viridis
Sevir.9G552600 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 54281091-54286090 Setaria viridis
Sevir.9G552600 5.0kb downstream 5.0kb downstream 12242 true Chr_09: 54286091-54298332 Setaria viridis
Sevir.9G552600 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 54293333-54298332 Setaria viridis
Sevir.9G552600 10.0kb upstream 10.0kb upstream 17242 true Chr_09: 54276091-54293332 Setaria viridis
Sevir.9G552600 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 54276091-54286090 Setaria viridis
Sevir.9G552600 10.0kb downstream 10.0kb downstream 17242 true Chr_09: 54286091-54303332 Setaria viridis
Sevir.9G552600 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 54293333-54303332 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122025860 5273 Angiosperm View MSA
122177032 5267 Panicoideae View MSA
124588210 5269 Grass View MSA
121295930 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain