Gene : Sevir.9G487700 S. viridis v2.1
Defline:  (1 of 1) PTHR11685:SF119 - E3 UBIQUITIN-PROTEIN LIGASE ARI2-RELATED Genomic Order:  5336
Name:  ? Sevir.9G487700 Secondary Identifier:  ? PAC:40614151
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7511 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G487700 0.5kb upstream 0.5kb upstream 5373 true Chr_09: 49941685-49947057 Setaria viridis
Sevir.9G487700 0.5kb upstream 0.5kb upstream 500 false Chr_09: 49941685-49942184 Setaria viridis
Sevir.9G487700 0.5kb downstream 0.5kb downstream 5373 true Chr_09: 49942185-49947557 Setaria viridis
Sevir.9G487700 0.5kb downstream 0.5kb downstream 500 false Chr_09: 49947058-49947557 Setaria viridis
Sevir.9G487700 1.0kb upstream 1.0kb upstream 5873 true Chr_09: 49941185-49947057 Setaria viridis
Sevir.9G487700 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 49941185-49942184 Setaria viridis
Sevir.9G487700 1.0kb downstream 1.0kb downstream 5873 true Chr_09: 49942185-49948057 Setaria viridis
Sevir.9G487700 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 49947058-49948057 Setaria viridis
Sevir.9G487700 2.0kb upstream 2.0kb upstream 6873 true Chr_09: 49940185-49947057 Setaria viridis
Sevir.9G487700 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 49940185-49942184 Setaria viridis
Sevir.9G487700 2.0kb downstream 2.0kb downstream 6873 true Chr_09: 49942185-49949057 Setaria viridis
Sevir.9G487700 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 49947058-49949057 Setaria viridis
Sevir.9G487700 5.0kb upstream 5.0kb upstream 9873 true Chr_09: 49937185-49947057 Setaria viridis
Sevir.9G487700 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 49937185-49942184 Setaria viridis
Sevir.9G487700 5.0kb downstream 5.0kb downstream 9873 true Chr_09: 49942185-49952057 Setaria viridis
Sevir.9G487700 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 49947058-49952057 Setaria viridis
Sevir.9G487700 10.0kb upstream 10.0kb upstream 14873 true Chr_09: 49932185-49947057 Setaria viridis
Sevir.9G487700 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 49932185-49942184 Setaria viridis
Sevir.9G487700 10.0kb downstream 10.0kb downstream 14873 true Chr_09: 49942185-49957057 Setaria viridis
Sevir.9G487700 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 49947058-49957057 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184158 5267 Panicoideae View MSA
124575317 5269 Grass View MSA
122046859 5273 Angiosperm View MSA
121343815 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain