Gene : Sevir.9G469600 S. viridis v2.1
Defline:  (1 of 1) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  5139
Name:  ? Sevir.9G469600 Secondary Identifier:  ? PAC:40611329
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis ARO-PWY Setaria viridis pathologic  
Sviridis PWY-6163 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G469600 0.5kb upstream 0.5kb upstream 4890 true Chr_09: 48603429-48608318 Setaria viridis
Sevir.9G469600 0.5kb upstream 0.5kb upstream 500 false Chr_09: 48603429-48603928 Setaria viridis
Sevir.9G469600 0.5kb downstream 0.5kb downstream 4890 true Chr_09: 48603929-48608818 Setaria viridis
Sevir.9G469600 0.5kb downstream 0.5kb downstream 500 false Chr_09: 48608319-48608818 Setaria viridis
Sevir.9G469600 1.0kb upstream 1.0kb upstream 5390 true Chr_09: 48602929-48608318 Setaria viridis
Sevir.9G469600 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 48602929-48603928 Setaria viridis
Sevir.9G469600 1.0kb downstream 1.0kb downstream 5390 true Chr_09: 48603929-48609318 Setaria viridis
Sevir.9G469600 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 48608319-48609318 Setaria viridis
Sevir.9G469600 2.0kb upstream 2.0kb upstream 6390 true Chr_09: 48601929-48608318 Setaria viridis
Sevir.9G469600 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 48601929-48603928 Setaria viridis
Sevir.9G469600 2.0kb downstream 2.0kb downstream 6390 true Chr_09: 48603929-48610318 Setaria viridis
Sevir.9G469600 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 48608319-48610318 Setaria viridis
Sevir.9G469600 5.0kb upstream 5.0kb upstream 9390 true Chr_09: 48598929-48608318 Setaria viridis
Sevir.9G469600 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 48598929-48603928 Setaria viridis
Sevir.9G469600 5.0kb downstream 5.0kb downstream 9390 true Chr_09: 48603929-48613318 Setaria viridis
Sevir.9G469600 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 48608319-48613318 Setaria viridis
Sevir.9G469600 10.0kb upstream 10.0kb upstream 14390 true Chr_09: 48593929-48608318 Setaria viridis
Sevir.9G469600 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 48593929-48603928 Setaria viridis
Sevir.9G469600 10.0kb downstream 10.0kb downstream 14390 true Chr_09: 48603929-48618318 Setaria viridis
Sevir.9G469600 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 48608319-48618318 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
122196469 5267 Panicoideae View MSA
124574152 5269 Grass View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain