Gene : Sevir.9G349700 S. viridis v2.1
Defline:  (1 of 1) PTHR10742:SF284 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A Genomic Order:  3846
Name:  ? Sevir.9G349700 Secondary Identifier:  ? PAC:40609636
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-6441 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G349700 0.5kb upstream 0.5kb upstream 12247 true Chr_09: 38800499-38812745 Setaria viridis
Sevir.9G349700 0.5kb upstream 0.5kb upstream 500 false Chr_09: 38812246-38812745 Setaria viridis
Sevir.9G349700 0.5kb downstream 0.5kb downstream 12247 true Chr_09: 38799999-38812245 Setaria viridis
Sevir.9G349700 0.5kb downstream 0.5kb downstream 500 false Chr_09: 38799999-38800498 Setaria viridis
Sevir.9G349700 1.0kb upstream 1.0kb upstream 12747 true Chr_09: 38800499-38813245 Setaria viridis
Sevir.9G349700 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 38812246-38813245 Setaria viridis
Sevir.9G349700 1.0kb downstream 1.0kb downstream 12747 true Chr_09: 38799499-38812245 Setaria viridis
Sevir.9G349700 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 38799499-38800498 Setaria viridis
Sevir.9G349700 2.0kb upstream 2.0kb upstream 13747 true Chr_09: 38800499-38814245 Setaria viridis
Sevir.9G349700 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 38812246-38814245 Setaria viridis
Sevir.9G349700 2.0kb downstream 2.0kb downstream 13747 true Chr_09: 38798499-38812245 Setaria viridis
Sevir.9G349700 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 38798499-38800498 Setaria viridis
Sevir.9G349700 5.0kb upstream 5.0kb upstream 16747 true Chr_09: 38800499-38817245 Setaria viridis
Sevir.9G349700 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 38812246-38817245 Setaria viridis
Sevir.9G349700 5.0kb downstream 5.0kb downstream 16747 true Chr_09: 38795499-38812245 Setaria viridis
Sevir.9G349700 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 38795499-38800498 Setaria viridis
Sevir.9G349700 10.0kb upstream 10.0kb upstream 21747 true Chr_09: 38800499-38822245 Setaria viridis
Sevir.9G349700 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 38812246-38822245 Setaria viridis
Sevir.9G349700 10.0kb downstream 10.0kb downstream 21747 true Chr_09: 38790499-38812245 Setaria viridis
Sevir.9G349700 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 38790499-38800498 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186700 5267 Panicoideae View MSA
124576158 5269 Grass View MSA
122046463 5273 Angiosperm View MSA
121349079 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain