Gene : Sevir.1G100800 S. viridis v2.1
Defline:  (1 of 1) PTHR10210//PTHR10210:SF56 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE // SUBFAMILY NOT NAMED Genomic Order:  1113
Name:  ? Sevir.1G100800 Secondary Identifier:  ? PAC:40608011
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY0-662 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G100800 0.5kb upstream 0.5kb upstream 4986 true Chr_01: 8721104-8726089 Setaria viridis
Sevir.1G100800 0.5kb upstream 0.5kb upstream 500 false Chr_01: 8721104-8721603 Setaria viridis
Sevir.1G100800 0.5kb downstream 0.5kb downstream 4986 true Chr_01: 8721604-8726589 Setaria viridis
Sevir.1G100800 0.5kb downstream 0.5kb downstream 500 false Chr_01: 8726090-8726589 Setaria viridis
Sevir.1G100800 1.0kb upstream 1.0kb upstream 5486 true Chr_01: 8720604-8726089 Setaria viridis
Sevir.1G100800 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 8720604-8721603 Setaria viridis
Sevir.1G100800 1.0kb downstream 1.0kb downstream 5486 true Chr_01: 8721604-8727089 Setaria viridis
Sevir.1G100800 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 8726090-8727089 Setaria viridis
Sevir.1G100800 2.0kb upstream 2.0kb upstream 6486 true Chr_01: 8719604-8726089 Setaria viridis
Sevir.1G100800 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 8719604-8721603 Setaria viridis
Sevir.1G100800 2.0kb downstream 2.0kb downstream 6486 true Chr_01: 8721604-8728089 Setaria viridis
Sevir.1G100800 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 8726090-8728089 Setaria viridis
Sevir.1G100800 5.0kb upstream 5.0kb upstream 9486 true Chr_01: 8716604-8726089 Setaria viridis
Sevir.1G100800 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 8716604-8721603 Setaria viridis
Sevir.1G100800 5.0kb downstream 5.0kb downstream 9486 true Chr_01: 8721604-8731089 Setaria viridis
Sevir.1G100800 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 8726090-8731089 Setaria viridis
Sevir.1G100800 10.0kb upstream 10.0kb upstream 14486 true Chr_01: 8711604-8726089 Setaria viridis
Sevir.1G100800 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 8711604-8721603 Setaria viridis
Sevir.1G100800 10.0kb downstream 10.0kb downstream 14486 true Chr_01: 8721604-8736089 Setaria viridis
Sevir.1G100800 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 8726090-8736089 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181109 5267 Panicoideae View MSA
124589455 5269 Grass View MSA
122042217 5273 Angiosperm View MSA
121347994 5274 Embryophyte View MSA
123427852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain