Gene : Sevir.1G102900 S. viridis v2.1
Defline:  (1 of 1) K01703 - 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit (leuC) Genomic Order:  1138
Name:  ? Sevir.1G102900 Secondary Identifier:  ? PAC:40607835
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis BRANCHED-CHAIN-AA-SYN-PWY Setaria viridis pathologic  
Sviridis LEUSYN-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G102900 0.5kb upstream 0.5kb upstream 5159 true Chr_01: 8909518-8914676 Setaria viridis
Sevir.1G102900 0.5kb upstream 0.5kb upstream 500 false Chr_01: 8914177-8914676 Setaria viridis
Sevir.1G102900 0.5kb downstream 0.5kb downstream 5159 true Chr_01: 8909018-8914176 Setaria viridis
Sevir.1G102900 0.5kb downstream 0.5kb downstream 500 false Chr_01: 8909018-8909517 Setaria viridis
Sevir.1G102900 1.0kb upstream 1.0kb upstream 5659 true Chr_01: 8909518-8915176 Setaria viridis
Sevir.1G102900 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 8914177-8915176 Setaria viridis
Sevir.1G102900 1.0kb downstream 1.0kb downstream 5659 true Chr_01: 8908518-8914176 Setaria viridis
Sevir.1G102900 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 8908518-8909517 Setaria viridis
Sevir.1G102900 2.0kb upstream 2.0kb upstream 6659 true Chr_01: 8909518-8916176 Setaria viridis
Sevir.1G102900 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 8914177-8916176 Setaria viridis
Sevir.1G102900 2.0kb downstream 2.0kb downstream 6659 true Chr_01: 8907518-8914176 Setaria viridis
Sevir.1G102900 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 8907518-8909517 Setaria viridis
Sevir.1G102900 5.0kb upstream 5.0kb upstream 9659 true Chr_01: 8909518-8919176 Setaria viridis
Sevir.1G102900 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 8914177-8919176 Setaria viridis
Sevir.1G102900 5.0kb downstream 5.0kb downstream 9659 true Chr_01: 8904518-8914176 Setaria viridis
Sevir.1G102900 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 8904518-8909517 Setaria viridis
Sevir.1G102900 10.0kb upstream 10.0kb upstream 14659 true Chr_01: 8909518-8924176 Setaria viridis
Sevir.1G102900 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 8914177-8924176 Setaria viridis
Sevir.1G102900 10.0kb downstream 10.0kb downstream 14659 true Chr_01: 8899518-8914176 Setaria viridis
Sevir.1G102900 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 8899518-8909517 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186218 5267 Panicoideae View MSA
124568502 5269 Grass View MSA
122047334 5273 Angiosperm View MSA
121347218 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain