Gene : Sevir.1G145596 S. viridis v2.1
Defline:  (1 of 1) K02262 - cytochrome c oxidase subunit 3 (COX3) Genomic Order:  1632
Name:  ? Sevir.1G145596 Secondary Identifier:  ? PAC:40605946
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-3781 Setaria viridis pathologic  
Sviridis PWY-7279 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G145596 0.5kb upstream 0.5kb upstream 2354 true Chr_01: 16934083-16936436 Setaria viridis
Sevir.1G145596 0.5kb upstream 0.5kb upstream 500 false Chr_01: 16934083-16934582 Setaria viridis
Sevir.1G145596 0.5kb downstream 0.5kb downstream 2354 true Chr_01: 16934583-16936936 Setaria viridis
Sevir.1G145596 0.5kb downstream 0.5kb downstream 500 false Chr_01: 16936437-16936936 Setaria viridis
Sevir.1G145596 1.0kb upstream 1.0kb upstream 2854 true Chr_01: 16933583-16936436 Setaria viridis
Sevir.1G145596 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 16933583-16934582 Setaria viridis
Sevir.1G145596 1.0kb downstream 1.0kb downstream 2854 true Chr_01: 16934583-16937436 Setaria viridis
Sevir.1G145596 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 16936437-16937436 Setaria viridis
Sevir.1G145596 2.0kb upstream 2.0kb upstream 3854 true Chr_01: 16932583-16936436 Setaria viridis
Sevir.1G145596 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 16932583-16934582 Setaria viridis
Sevir.1G145596 2.0kb downstream 2.0kb downstream 3854 true Chr_01: 16934583-16938436 Setaria viridis
Sevir.1G145596 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 16936437-16938436 Setaria viridis
Sevir.1G145596 5.0kb upstream 5.0kb upstream 6854 true Chr_01: 16929583-16936436 Setaria viridis
Sevir.1G145596 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 16929583-16934582 Setaria viridis
Sevir.1G145596 5.0kb downstream 5.0kb downstream 6854 true Chr_01: 16934583-16941436 Setaria viridis
Sevir.1G145596 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 16936437-16941436 Setaria viridis
Sevir.1G145596 10.0kb upstream 10.0kb upstream 11854 true Chr_01: 16924583-16936436 Setaria viridis
Sevir.1G145596 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 16924583-16934582 Setaria viridis
Sevir.1G145596 10.0kb downstream 10.0kb downstream 11854 true Chr_01: 16934583-16946436 Setaria viridis
Sevir.1G145596 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 16936437-16946436 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185022 5267 Panicoideae View MSA
124584197 5269 Grass View MSA
122050963 5273 Angiosperm View MSA
121348326 5274 Embryophyte View MSA
123426097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain