Gene : Sevir.1G138350 S. viridis v2.1
Defline:  (1 of 14) PF04195 - Putative gypsy type transposon (Transposase_28) Genomic Order:  1533
Name:  ? Sevir.1G138350 Secondary Identifier:  ? PAC:40604973
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G138350 0.5kb upstream 0.5kb upstream 1894 true Chr_01: 14345400-14347293 Setaria viridis
Sevir.1G138350 0.5kb upstream 0.5kb upstream 500 false Chr_01: 14346794-14347293 Setaria viridis
Sevir.1G138350 0.5kb downstream 0.5kb downstream 1894 true Chr_01: 14344900-14346793 Setaria viridis
Sevir.1G138350 0.5kb downstream 0.5kb downstream 500 false Chr_01: 14344900-14345399 Setaria viridis
Sevir.1G138350 1.0kb upstream 1.0kb upstream 2394 true Chr_01: 14345400-14347793 Setaria viridis
Sevir.1G138350 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 14346794-14347793 Setaria viridis
Sevir.1G138350 1.0kb downstream 1.0kb downstream 2394 true Chr_01: 14344400-14346793 Setaria viridis
Sevir.1G138350 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 14344400-14345399 Setaria viridis
Sevir.1G138350 2.0kb upstream 2.0kb upstream 3394 true Chr_01: 14345400-14348793 Setaria viridis
Sevir.1G138350 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 14346794-14348793 Setaria viridis
Sevir.1G138350 2.0kb downstream 2.0kb downstream 3394 true Chr_01: 14343400-14346793 Setaria viridis
Sevir.1G138350 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 14343400-14345399 Setaria viridis
Sevir.1G138350 5.0kb upstream 5.0kb upstream 6394 true Chr_01: 14345400-14351793 Setaria viridis
Sevir.1G138350 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 14346794-14351793 Setaria viridis
Sevir.1G138350 5.0kb downstream 5.0kb downstream 6394 true Chr_01: 14340400-14346793 Setaria viridis
Sevir.1G138350 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 14340400-14345399 Setaria viridis
Sevir.1G138350 10.0kb upstream 10.0kb upstream 11394 true Chr_01: 14345400-14356793 Setaria viridis
Sevir.1G138350 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 14346794-14356793 Setaria viridis
Sevir.1G138350 10.0kb downstream 10.0kb downstream 11394 true Chr_01: 14335400-14346793 Setaria viridis
Sevir.1G138350 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 14335400-14345399 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121995298 5273 Angiosperm View MSA
122117596 5267 Panicoideae View MSA
124587794 5269 Grass View MSA
121265492 5274 Embryophyte View MSA
123303874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain