Gene : Sevir.9G296800 S. viridis v2.1
Defline:  (1 of 1) K12479 - vacuolar protein sorting-associated protein 45 (VPS45) Genomic Order:  3266
Name:  ? Sevir.9G296800 Secondary Identifier:  ? PAC:40613711
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G296800 0.5kb upstream 0.5kb upstream 10560 true Chr_09: 31788986-31799545 Setaria viridis
Sevir.9G296800 0.5kb upstream 0.5kb upstream 500 false Chr_09: 31799046-31799545 Setaria viridis
Sevir.9G296800 0.5kb downstream 0.5kb downstream 10560 true Chr_09: 31788486-31799045 Setaria viridis
Sevir.9G296800 0.5kb downstream 0.5kb downstream 500 false Chr_09: 31788486-31788985 Setaria viridis
Sevir.9G296800 1.0kb upstream 1.0kb upstream 11060 true Chr_09: 31788986-31800045 Setaria viridis
Sevir.9G296800 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 31799046-31800045 Setaria viridis
Sevir.9G296800 1.0kb downstream 1.0kb downstream 11060 true Chr_09: 31787986-31799045 Setaria viridis
Sevir.9G296800 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 31787986-31788985 Setaria viridis
Sevir.9G296800 2.0kb upstream 2.0kb upstream 12060 true Chr_09: 31788986-31801045 Setaria viridis
Sevir.9G296800 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 31799046-31801045 Setaria viridis
Sevir.9G296800 2.0kb downstream 2.0kb downstream 12060 true Chr_09: 31786986-31799045 Setaria viridis
Sevir.9G296800 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 31786986-31788985 Setaria viridis
Sevir.9G296800 5.0kb upstream 5.0kb upstream 15060 true Chr_09: 31788986-31804045 Setaria viridis
Sevir.9G296800 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 31799046-31804045 Setaria viridis
Sevir.9G296800 5.0kb downstream 5.0kb downstream 15060 true Chr_09: 31783986-31799045 Setaria viridis
Sevir.9G296800 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 31783986-31788985 Setaria viridis
Sevir.9G296800 10.0kb upstream 10.0kb upstream 20060 true Chr_09: 31788986-31809045 Setaria viridis
Sevir.9G296800 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 31799046-31809045 Setaria viridis
Sevir.9G296800 10.0kb downstream 10.0kb downstream 20060 true Chr_09: 31778986-31799045 Setaria viridis
Sevir.9G296800 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 31778986-31788985 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186231 5267 Panicoideae View MSA
124576173 5269 Grass View MSA
122044775 5273 Angiosperm View MSA
121347331 5274 Embryophyte View MSA
123424934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain