Gene : Sevir.1G079600 S. viridis v2.1
Defline:  (1 of 1) 5.3.1.13 - Arabinose-5-phosphate isomerase / Phosphoarabinoisomerase Genomic Order:  882
Name:  ? Sevir.1G079600 Secondary Identifier:  ? PAC:40604888
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-1269 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G079600 0.5kb upstream 0.5kb upstream 4152 true Chr_01: 7219780-7223931 Setaria viridis
Sevir.1G079600 0.5kb upstream 0.5kb upstream 500 false Chr_01: 7223432-7223931 Setaria viridis
Sevir.1G079600 0.5kb downstream 0.5kb downstream 4152 true Chr_01: 7219280-7223431 Setaria viridis
Sevir.1G079600 0.5kb downstream 0.5kb downstream 500 false Chr_01: 7219280-7219779 Setaria viridis
Sevir.1G079600 1.0kb upstream 1.0kb upstream 4652 true Chr_01: 7219780-7224431 Setaria viridis
Sevir.1G079600 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 7223432-7224431 Setaria viridis
Sevir.1G079600 1.0kb downstream 1.0kb downstream 4652 true Chr_01: 7218780-7223431 Setaria viridis
Sevir.1G079600 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 7218780-7219779 Setaria viridis
Sevir.1G079600 2.0kb upstream 2.0kb upstream 5652 true Chr_01: 7219780-7225431 Setaria viridis
Sevir.1G079600 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 7223432-7225431 Setaria viridis
Sevir.1G079600 2.0kb downstream 2.0kb downstream 5652 true Chr_01: 7217780-7223431 Setaria viridis
Sevir.1G079600 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 7217780-7219779 Setaria viridis
Sevir.1G079600 5.0kb upstream 5.0kb upstream 8652 true Chr_01: 7219780-7228431 Setaria viridis
Sevir.1G079600 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 7223432-7228431 Setaria viridis
Sevir.1G079600 5.0kb downstream 5.0kb downstream 8652 true Chr_01: 7214780-7223431 Setaria viridis
Sevir.1G079600 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 7214780-7219779 Setaria viridis
Sevir.1G079600 10.0kb upstream 10.0kb upstream 13652 true Chr_01: 7219780-7233431 Setaria viridis
Sevir.1G079600 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 7223432-7233431 Setaria viridis
Sevir.1G079600 10.0kb downstream 10.0kb downstream 13652 true Chr_01: 7209780-7223431 Setaria viridis
Sevir.1G079600 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 7209780-7219779 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041154 5273 Angiosperm View MSA
122178842 5267 Panicoideae View MSA
124577036 5269 Grass View MSA
121347729 5274 Embryophyte View MSA
123423941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain