Gene : Sevir.1G070200 S. viridis v2.1
Defline:  (1 of 2) PTHR10836//PTHR10836:SF46 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  778
Name:  ? Sevir.1G070200 Secondary Identifier:  ? PAC:40604042
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis ANAEROFRUCAT-PWY Setaria viridis pathologic  
Sviridis ANAGLYCOLYSIS-PWY Setaria viridis pathologic  
Sviridis GLUCONEO-PWY Setaria viridis pathologic  
Sviridis PWY-1042 Setaria viridis pathologic  
Sviridis PWY-5464 Setaria viridis pathologic  
Sviridis SUCSYN-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G070200 0.5kb upstream 0.5kb upstream 5541 true Chr_01: 6328731-6334271 Setaria viridis
Sevir.1G070200 0.5kb upstream 0.5kb upstream 500 false Chr_01: 6333772-6334271 Setaria viridis
Sevir.1G070200 0.5kb downstream 0.5kb downstream 5541 true Chr_01: 6328231-6333771 Setaria viridis
Sevir.1G070200 0.5kb downstream 0.5kb downstream 500 false Chr_01: 6328231-6328730 Setaria viridis
Sevir.1G070200 1.0kb upstream 1.0kb upstream 6041 true Chr_01: 6328731-6334771 Setaria viridis
Sevir.1G070200 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 6333772-6334771 Setaria viridis
Sevir.1G070200 1.0kb downstream 1.0kb downstream 6041 true Chr_01: 6327731-6333771 Setaria viridis
Sevir.1G070200 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 6327731-6328730 Setaria viridis
Sevir.1G070200 2.0kb upstream 2.0kb upstream 7041 true Chr_01: 6328731-6335771 Setaria viridis
Sevir.1G070200 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 6333772-6335771 Setaria viridis
Sevir.1G070200 2.0kb downstream 2.0kb downstream 7041 true Chr_01: 6326731-6333771 Setaria viridis
Sevir.1G070200 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 6326731-6328730 Setaria viridis
Sevir.1G070200 5.0kb upstream 5.0kb upstream 10041 true Chr_01: 6328731-6338771 Setaria viridis
Sevir.1G070200 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 6333772-6338771 Setaria viridis
Sevir.1G070200 5.0kb downstream 5.0kb downstream 10041 true Chr_01: 6323731-6333771 Setaria viridis
Sevir.1G070200 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 6323731-6328730 Setaria viridis
Sevir.1G070200 10.0kb upstream 10.0kb upstream 15041 true Chr_01: 6328731-6343771 Setaria viridis
Sevir.1G070200 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 6333772-6343771 Setaria viridis
Sevir.1G070200 10.0kb downstream 10.0kb downstream 15041 true Chr_01: 6318731-6333771 Setaria viridis
Sevir.1G070200 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 6318731-6328730 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175260 5267 Panicoideae View MSA
124572618 5269 Grass View MSA
122042179 5273 Angiosperm View MSA
121345581 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain