Gene : Sevir.1G261200 S. viridis v2.1
Defline:  (1 of 2) 4.2.1.18 - Methylglutaconyl-CoA hydratase Genomic Order:  2885
Name:  ? Sevir.1G261200 Secondary Identifier:  ? PAC:40608477
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis LEU-DEG2-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G261200 0.5kb upstream 0.5kb upstream 3534 true Chr_01: 32953307-32956840 Setaria viridis
Sevir.1G261200 0.5kb upstream 0.5kb upstream 500 false Chr_01: 32953307-32953806 Setaria viridis
Sevir.1G261200 0.5kb downstream 0.5kb downstream 3534 true Chr_01: 32953807-32957340 Setaria viridis
Sevir.1G261200 0.5kb downstream 0.5kb downstream 500 false Chr_01: 32956841-32957340 Setaria viridis
Sevir.1G261200 1.0kb upstream 1.0kb upstream 4034 true Chr_01: 32952807-32956840 Setaria viridis
Sevir.1G261200 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 32952807-32953806 Setaria viridis
Sevir.1G261200 1.0kb downstream 1.0kb downstream 4034 true Chr_01: 32953807-32957840 Setaria viridis
Sevir.1G261200 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 32956841-32957840 Setaria viridis
Sevir.1G261200 2.0kb upstream 2.0kb upstream 5034 true Chr_01: 32951807-32956840 Setaria viridis
Sevir.1G261200 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 32951807-32953806 Setaria viridis
Sevir.1G261200 2.0kb downstream 2.0kb downstream 5034 true Chr_01: 32953807-32958840 Setaria viridis
Sevir.1G261200 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 32956841-32958840 Setaria viridis
Sevir.1G261200 5.0kb upstream 5.0kb upstream 8034 true Chr_01: 32948807-32956840 Setaria viridis
Sevir.1G261200 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 32948807-32953806 Setaria viridis
Sevir.1G261200 5.0kb downstream 5.0kb downstream 8034 true Chr_01: 32953807-32961840 Setaria viridis
Sevir.1G261200 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 32956841-32961840 Setaria viridis
Sevir.1G261200 10.0kb upstream 10.0kb upstream 13034 true Chr_01: 32943807-32956840 Setaria viridis
Sevir.1G261200 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 32943807-32953806 Setaria viridis
Sevir.1G261200 10.0kb downstream 10.0kb downstream 13034 true Chr_01: 32953807-32966840 Setaria viridis
Sevir.1G261200 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 32956841-32966840 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182924 5267 Panicoideae View MSA
124579335 5269 Grass View MSA
122045797 5273 Angiosperm View MSA
121351751 5274 Embryophyte View MSA
123427880 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain