Gene : Sevir.9G287500 S. viridis v2.1
Defline:  (1 of 3) K01872 - alanyl-tRNA synthetase (AARS, alaS) Genomic Order:  3164
Name:  ? Sevir.9G287500 Secondary Identifier:  ? PAC:40611862
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis TRNA-CHARGING-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G287500 0.5kb upstream 0.5kb upstream 14067 true Chr_09: 29611254-29625320 Setaria viridis
Sevir.9G287500 0.5kb upstream 0.5kb upstream 500 false Chr_09: 29611254-29611753 Setaria viridis
Sevir.9G287500 0.5kb downstream 0.5kb downstream 14067 true Chr_09: 29611754-29625820 Setaria viridis
Sevir.9G287500 0.5kb downstream 0.5kb downstream 500 false Chr_09: 29625321-29625820 Setaria viridis
Sevir.9G287500 1.0kb upstream 1.0kb upstream 14567 true Chr_09: 29610754-29625320 Setaria viridis
Sevir.9G287500 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 29610754-29611753 Setaria viridis
Sevir.9G287500 1.0kb downstream 1.0kb downstream 14567 true Chr_09: 29611754-29626320 Setaria viridis
Sevir.9G287500 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 29625321-29626320 Setaria viridis
Sevir.9G287500 2.0kb upstream 2.0kb upstream 15567 true Chr_09: 29609754-29625320 Setaria viridis
Sevir.9G287500 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 29609754-29611753 Setaria viridis
Sevir.9G287500 2.0kb downstream 2.0kb downstream 15567 true Chr_09: 29611754-29627320 Setaria viridis
Sevir.9G287500 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 29625321-29627320 Setaria viridis
Sevir.9G287500 5.0kb upstream 5.0kb upstream 18567 true Chr_09: 29606754-29625320 Setaria viridis
Sevir.9G287500 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 29606754-29611753 Setaria viridis
Sevir.9G287500 5.0kb downstream 5.0kb downstream 18567 true Chr_09: 29611754-29630320 Setaria viridis
Sevir.9G287500 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 29625321-29630320 Setaria viridis
Sevir.9G287500 10.0kb upstream 10.0kb upstream 23567 true Chr_09: 29601754-29625320 Setaria viridis
Sevir.9G287500 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 29601754-29611753 Setaria viridis
Sevir.9G287500 10.0kb downstream 10.0kb downstream 23567 true Chr_09: 29611754-29635320 Setaria viridis
Sevir.9G287500 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 29625321-29635320 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184720 5267 Panicoideae View MSA
124569806 5269 Grass View MSA
122047019 5273 Angiosperm View MSA
121346985 5274 Embryophyte View MSA
123424131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain