Gene : Sevir.9G247800 S. viridis v2.1
Defline:  (1 of 1) PTHR33428//PTHR33428:SF1 - FAMILY NOT NAMED // CHLOROPHYLLASE-2, CHLOROPLASTIC Genomic Order:  2948
Name:  ? Sevir.9G247800 Secondary Identifier:  ? PAC:40610974
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5098 Setaria viridis pathologic  
Sviridis PWY-6927 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G247800 0.5kb upstream 0.5kb upstream 2110 true Chr_09: 22501290-22503399 Setaria viridis
Sevir.9G247800 0.5kb upstream 0.5kb upstream 500 false Chr_09: 22501290-22501789 Setaria viridis
Sevir.9G247800 0.5kb downstream 0.5kb downstream 2110 true Chr_09: 22501790-22503899 Setaria viridis
Sevir.9G247800 0.5kb downstream 0.5kb downstream 500 false Chr_09: 22503400-22503899 Setaria viridis
Sevir.9G247800 1.0kb upstream 1.0kb upstream 2610 true Chr_09: 22500790-22503399 Setaria viridis
Sevir.9G247800 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 22500790-22501789 Setaria viridis
Sevir.9G247800 1.0kb downstream 1.0kb downstream 2610 true Chr_09: 22501790-22504399 Setaria viridis
Sevir.9G247800 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 22503400-22504399 Setaria viridis
Sevir.9G247800 2.0kb upstream 2.0kb upstream 3610 true Chr_09: 22499790-22503399 Setaria viridis
Sevir.9G247800 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 22499790-22501789 Setaria viridis
Sevir.9G247800 2.0kb downstream 2.0kb downstream 3610 true Chr_09: 22501790-22505399 Setaria viridis
Sevir.9G247800 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 22503400-22505399 Setaria viridis
Sevir.9G247800 5.0kb upstream 5.0kb upstream 6610 true Chr_09: 22496790-22503399 Setaria viridis
Sevir.9G247800 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 22496790-22501789 Setaria viridis
Sevir.9G247800 5.0kb downstream 5.0kb downstream 6610 true Chr_09: 22501790-22508399 Setaria viridis
Sevir.9G247800 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 22503400-22508399 Setaria viridis
Sevir.9G247800 10.0kb upstream 10.0kb upstream 11610 true Chr_09: 22491790-22503399 Setaria viridis
Sevir.9G247800 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 22491790-22501789 Setaria viridis
Sevir.9G247800 10.0kb downstream 10.0kb downstream 11610 true Chr_09: 22501790-22513399 Setaria viridis
Sevir.9G247800 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 22503400-22513399 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182979 5267 Panicoideae View MSA
124570065 5269 Grass View MSA
122043389 5273 Angiosperm View MSA
121344751 5274 Embryophyte View MSA
123428003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain