Gene : Sevir.9G247400 S. viridis v2.1
Defline:  (1 of 1) PTHR23418//PTHR23418:SF4 - ACIREDUCTONE DIOXYGENASE // 1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4 Genomic Order:  2733
Name:  ? Sevir.9G247400 Secondary Identifier:  ? PAC:40611328
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-4361 Setaria viridis pathologic  
Sviridis PWY-7270 Setaria viridis pathologic  
Sviridis PWY-7528 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G247400 0.5kb upstream 0.5kb upstream 2983 true Chr_09: 19469507-19472489 Setaria viridis
Sevir.9G247400 0.5kb upstream 0.5kb upstream 500 false Chr_09: 19471990-19472489 Setaria viridis
Sevir.9G247400 0.5kb downstream 0.5kb downstream 2983 true Chr_09: 19469007-19471989 Setaria viridis
Sevir.9G247400 0.5kb downstream 0.5kb downstream 500 false Chr_09: 19469007-19469506 Setaria viridis
Sevir.9G247400 1.0kb upstream 1.0kb upstream 3483 true Chr_09: 19469507-19472989 Setaria viridis
Sevir.9G247400 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 19471990-19472989 Setaria viridis
Sevir.9G247400 1.0kb downstream 1.0kb downstream 3483 true Chr_09: 19468507-19471989 Setaria viridis
Sevir.9G247400 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 19468507-19469506 Setaria viridis
Sevir.9G247400 2.0kb upstream 2.0kb upstream 4483 true Chr_09: 19469507-19473989 Setaria viridis
Sevir.9G247400 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 19471990-19473989 Setaria viridis
Sevir.9G247400 2.0kb downstream 2.0kb downstream 4483 true Chr_09: 19467507-19471989 Setaria viridis
Sevir.9G247400 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 19467507-19469506 Setaria viridis
Sevir.9G247400 5.0kb upstream 5.0kb upstream 7483 true Chr_09: 19469507-19476989 Setaria viridis
Sevir.9G247400 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 19471990-19476989 Setaria viridis
Sevir.9G247400 5.0kb downstream 5.0kb downstream 7483 true Chr_09: 19464507-19471989 Setaria viridis
Sevir.9G247400 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 19464507-19469506 Setaria viridis
Sevir.9G247400 10.0kb upstream 10.0kb upstream 12483 true Chr_09: 19469507-19481989 Setaria viridis
Sevir.9G247400 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 19471990-19481989 Setaria viridis
Sevir.9G247400 10.0kb downstream 10.0kb downstream 12483 true Chr_09: 19459507-19471989 Setaria viridis
Sevir.9G247400 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 19459507-19469506 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180959 5267 Panicoideae View MSA
124572378 5269 Grass View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain