Gene : Sevir.1G294000 S. viridis v2.1
Defline:  (1 of 1) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase Genomic Order:  3236
Name:  ? Sevir.1G294000 Secondary Identifier:  ? PAC:40604758
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis ARGSYNBSUB-PWY Setaria viridis pathologic  
Sviridis ARGSYN-PWY Setaria viridis pathologic  
Sviridis CITRULBIO-PWY Setaria viridis pathologic  
Sviridis CITRULLINE-DEG-PWY Setaria viridis pathologic  
Sviridis PWY-4984 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G294000 0.5kb upstream 0.5kb upstream 3982 true Chr_01: 35453840-35457821 Setaria viridis
Sevir.1G294000 0.5kb upstream 0.5kb upstream 500 false Chr_01: 35453840-35454339 Setaria viridis
Sevir.1G294000 0.5kb downstream 0.5kb downstream 3982 true Chr_01: 35454340-35458321 Setaria viridis
Sevir.1G294000 0.5kb downstream 0.5kb downstream 500 false Chr_01: 35457822-35458321 Setaria viridis
Sevir.1G294000 1.0kb upstream 1.0kb upstream 4482 true Chr_01: 35453340-35457821 Setaria viridis
Sevir.1G294000 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 35453340-35454339 Setaria viridis
Sevir.1G294000 1.0kb downstream 1.0kb downstream 4482 true Chr_01: 35454340-35458821 Setaria viridis
Sevir.1G294000 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 35457822-35458821 Setaria viridis
Sevir.1G294000 2.0kb upstream 2.0kb upstream 5482 true Chr_01: 35452340-35457821 Setaria viridis
Sevir.1G294000 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 35452340-35454339 Setaria viridis
Sevir.1G294000 2.0kb downstream 2.0kb downstream 5482 true Chr_01: 35454340-35459821 Setaria viridis
Sevir.1G294000 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 35457822-35459821 Setaria viridis
Sevir.1G294000 5.0kb upstream 5.0kb upstream 8482 true Chr_01: 35449340-35457821 Setaria viridis
Sevir.1G294000 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 35449340-35454339 Setaria viridis
Sevir.1G294000 5.0kb downstream 5.0kb downstream 8482 true Chr_01: 35454340-35462821 Setaria viridis
Sevir.1G294000 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 35457822-35462821 Setaria viridis
Sevir.1G294000 10.0kb upstream 10.0kb upstream 13482 true Chr_01: 35444340-35457821 Setaria viridis
Sevir.1G294000 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 35444340-35454339 Setaria viridis
Sevir.1G294000 10.0kb downstream 10.0kb downstream 13482 true Chr_01: 35454340-35467821 Setaria viridis
Sevir.1G294000 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 35457822-35467821 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175374 5267 Panicoideae View MSA
124573214 5269 Grass View MSA
122042632 5273 Angiosperm View MSA
121351468 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain