Gene : Sevir.1G173900 S. viridis v2.1
Defline:  (1 of 1) 3.5.4.26//5.4.99.28 - Diaminohydroxyphosphoribosylaminopyrimidine deaminase // tRNA pseudouridine(32) synthase / Pseudouridine synthase RluA Genomic Order:  1932
Name:  ? Sevir.1G173900 Secondary Identifier:  ? PAC:40604130
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis RIBOSYN2-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G173900 0.5kb upstream 0.5kb upstream 7706 true Chr_01: 24448388-24456093 Setaria viridis
Sevir.1G173900 0.5kb upstream 0.5kb upstream 500 false Chr_01: 24448388-24448887 Setaria viridis
Sevir.1G173900 0.5kb downstream 0.5kb downstream 7706 true Chr_01: 24448888-24456593 Setaria viridis
Sevir.1G173900 0.5kb downstream 0.5kb downstream 500 false Chr_01: 24456094-24456593 Setaria viridis
Sevir.1G173900 1.0kb upstream 1.0kb upstream 8206 true Chr_01: 24447888-24456093 Setaria viridis
Sevir.1G173900 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 24447888-24448887 Setaria viridis
Sevir.1G173900 1.0kb downstream 1.0kb downstream 8206 true Chr_01: 24448888-24457093 Setaria viridis
Sevir.1G173900 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 24456094-24457093 Setaria viridis
Sevir.1G173900 2.0kb upstream 2.0kb upstream 9206 true Chr_01: 24446888-24456093 Setaria viridis
Sevir.1G173900 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 24446888-24448887 Setaria viridis
Sevir.1G173900 2.0kb downstream 2.0kb downstream 9206 true Chr_01: 24448888-24458093 Setaria viridis
Sevir.1G173900 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 24456094-24458093 Setaria viridis
Sevir.1G173900 5.0kb upstream 5.0kb upstream 12206 true Chr_01: 24443888-24456093 Setaria viridis
Sevir.1G173900 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 24443888-24448887 Setaria viridis
Sevir.1G173900 5.0kb downstream 5.0kb downstream 12206 true Chr_01: 24448888-24461093 Setaria viridis
Sevir.1G173900 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 24456094-24461093 Setaria viridis
Sevir.1G173900 10.0kb upstream 10.0kb upstream 17206 true Chr_01: 24438888-24456093 Setaria viridis
Sevir.1G173900 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 24438888-24448887 Setaria viridis
Sevir.1G173900 10.0kb downstream 10.0kb downstream 17206 true Chr_01: 24448888-24466093 Setaria viridis
Sevir.1G173900 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 24456094-24466093 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187188 5267 Panicoideae View MSA
124570511 5269 Grass View MSA
122047695 5273 Angiosperm View MSA
121349064 5274 Embryophyte View MSA
123426945 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain