Gene : Sevir.1G176000 S. viridis v2.1

Defline:  (1 of 1) KOG2164 - Predicted E3 ubiquitin ligase Genomic Order:  1953
Name:  ? Sevir.1G176000 Secondary Identifier:  ? PAC:40604200

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G176000 0.5kb upstream 0.5kb upstream 7973 true Chr_01: 24904971-24912943 Setaria viridis
Sevir.1G176000 0.5kb upstream 0.5kb upstream 500 false Chr_01: 24912444-24912943 Setaria viridis
Sevir.1G176000 0.5kb downstream 0.5kb downstream 7973 true Chr_01: 24904471-24912443 Setaria viridis
Sevir.1G176000 0.5kb downstream 0.5kb downstream 500 false Chr_01: 24904471-24904970 Setaria viridis
Sevir.1G176000 1.0kb upstream 1.0kb upstream 8473 true Chr_01: 24904971-24913443 Setaria viridis
Sevir.1G176000 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 24912444-24913443 Setaria viridis
Sevir.1G176000 1.0kb downstream 1.0kb downstream 8473 true Chr_01: 24903971-24912443 Setaria viridis
Sevir.1G176000 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 24903971-24904970 Setaria viridis
Sevir.1G176000 2.0kb upstream 2.0kb upstream 9473 true Chr_01: 24904971-24914443 Setaria viridis
Sevir.1G176000 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 24912444-24914443 Setaria viridis
Sevir.1G176000 2.0kb downstream 2.0kb downstream 9473 true Chr_01: 24902971-24912443 Setaria viridis
Sevir.1G176000 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 24902971-24904970 Setaria viridis
Sevir.1G176000 5.0kb upstream 5.0kb upstream 12473 true Chr_01: 24904971-24917443 Setaria viridis
Sevir.1G176000 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 24912444-24917443 Setaria viridis
Sevir.1G176000 5.0kb downstream 5.0kb downstream 12473 true Chr_01: 24899971-24912443 Setaria viridis
Sevir.1G176000 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 24899971-24904970 Setaria viridis
Sevir.1G176000 10.0kb upstream 10.0kb upstream 17473 true Chr_01: 24904971-24922443 Setaria viridis
Sevir.1G176000 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 24912444-24922443 Setaria viridis
Sevir.1G176000 10.0kb downstream 10.0kb downstream 17473 true Chr_01: 24894971-24912443 Setaria viridis
Sevir.1G176000 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 24894971-24904970 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175493 5267 Panicoideae View MSA
124577375 5269 Grass View MSA
122042542 5273 Angiosperm View MSA
121344560 5274 Embryophyte View MSA
123423758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain