Gene : Sevir.1G184400 S. viridis v2.1
Defline:  (1 of 1) K12251 - N-carbamoylputrescine amidase (aguB) Genomic Order:  2048
Name:  ? Sevir.1G184400 Secondary Identifier:  ? PAC:40605732
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis POLYAMINSYN3-PWY Setaria viridis pathologic  
Sviridis PWY-43 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G184400 0.5kb upstream 0.5kb upstream 4853 true Chr_01: 26012510-26017362 Setaria viridis
Sevir.1G184400 0.5kb upstream 0.5kb upstream 500 false Chr_01: 26012510-26013009 Setaria viridis
Sevir.1G184400 0.5kb downstream 0.5kb downstream 4853 true Chr_01: 26013010-26017862 Setaria viridis
Sevir.1G184400 0.5kb downstream 0.5kb downstream 500 false Chr_01: 26017363-26017862 Setaria viridis
Sevir.1G184400 1.0kb upstream 1.0kb upstream 5353 true Chr_01: 26012010-26017362 Setaria viridis
Sevir.1G184400 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 26012010-26013009 Setaria viridis
Sevir.1G184400 1.0kb downstream 1.0kb downstream 5353 true Chr_01: 26013010-26018362 Setaria viridis
Sevir.1G184400 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 26017363-26018362 Setaria viridis
Sevir.1G184400 2.0kb upstream 2.0kb upstream 6353 true Chr_01: 26011010-26017362 Setaria viridis
Sevir.1G184400 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 26011010-26013009 Setaria viridis
Sevir.1G184400 2.0kb downstream 2.0kb downstream 6353 true Chr_01: 26013010-26019362 Setaria viridis
Sevir.1G184400 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 26017363-26019362 Setaria viridis
Sevir.1G184400 5.0kb upstream 5.0kb upstream 9353 true Chr_01: 26008010-26017362 Setaria viridis
Sevir.1G184400 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 26008010-26013009 Setaria viridis
Sevir.1G184400 5.0kb downstream 5.0kb downstream 9353 true Chr_01: 26013010-26022362 Setaria viridis
Sevir.1G184400 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 26017363-26022362 Setaria viridis
Sevir.1G184400 10.0kb upstream 10.0kb upstream 14353 true Chr_01: 26003010-26017362 Setaria viridis
Sevir.1G184400 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 26003010-26013009 Setaria viridis
Sevir.1G184400 10.0kb downstream 10.0kb downstream 14353 true Chr_01: 26013010-26027362 Setaria viridis
Sevir.1G184400 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 26017363-26027362 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190715 5267 Panicoideae View MSA
124580285 5269 Grass View MSA
122048045 5273 Angiosperm View MSA
121345187 5274 Embryophyte View MSA
123425412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain