Gene : Sevir.1G312200 S. viridis v2.1
Defline:  (1 of 3) K01874 - methionyl-tRNA synthetase (MARS, metG) Genomic Order:  3430
Name:  ? Sevir.1G312200 Secondary Identifier:  ? PAC:40608028
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis TRNA-CHARGING-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G312200 0.5kb upstream 0.5kb upstream 6409 true Chr_01: 36615023-36621431 Setaria viridis
Sevir.1G312200 0.5kb upstream 0.5kb upstream 500 false Chr_01: 36620932-36621431 Setaria viridis
Sevir.1G312200 0.5kb downstream 0.5kb downstream 6409 true Chr_01: 36614523-36620931 Setaria viridis
Sevir.1G312200 0.5kb downstream 0.5kb downstream 500 false Chr_01: 36614523-36615022 Setaria viridis
Sevir.1G312200 1.0kb upstream 1.0kb upstream 6909 true Chr_01: 36615023-36621931 Setaria viridis
Sevir.1G312200 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 36620932-36621931 Setaria viridis
Sevir.1G312200 1.0kb downstream 1.0kb downstream 6909 true Chr_01: 36614023-36620931 Setaria viridis
Sevir.1G312200 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 36614023-36615022 Setaria viridis
Sevir.1G312200 2.0kb upstream 2.0kb upstream 7909 true Chr_01: 36615023-36622931 Setaria viridis
Sevir.1G312200 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 36620932-36622931 Setaria viridis
Sevir.1G312200 2.0kb downstream 2.0kb downstream 7909 true Chr_01: 36613023-36620931 Setaria viridis
Sevir.1G312200 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 36613023-36615022 Setaria viridis
Sevir.1G312200 5.0kb upstream 5.0kb upstream 10909 true Chr_01: 36615023-36625931 Setaria viridis
Sevir.1G312200 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 36620932-36625931 Setaria viridis
Sevir.1G312200 5.0kb downstream 5.0kb downstream 10909 true Chr_01: 36610023-36620931 Setaria viridis
Sevir.1G312200 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 36610023-36615022 Setaria viridis
Sevir.1G312200 10.0kb upstream 10.0kb upstream 15909 true Chr_01: 36615023-36630931 Setaria viridis
Sevir.1G312200 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 36620932-36630931 Setaria viridis
Sevir.1G312200 10.0kb downstream 10.0kb downstream 15909 true Chr_01: 36605023-36620931 Setaria viridis
Sevir.1G312200 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 36605023-36615022 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029887 5273 Angiosperm View MSA
122187020 5267 Panicoideae View MSA
124465901 5269 Grass View MSA
121348816 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain