Gene : Sevir.1G307100 S. viridis v2.1
Defline:  (1 of 1) PTHR31311//PTHR31311:SF3 - FAMILY NOT NAMED // GLYCOSYLTRANSFERASE 6-RELATED Genomic Order:  3376
Name:  ? Sevir.1G307100 Secondary Identifier:  ? PAC:40604214
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5936 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G307100 0.5kb upstream 0.5kb upstream 2334 true Chr_01: 36338705-36341038 Setaria viridis
Sevir.1G307100 0.5kb upstream 0.5kb upstream 500 false Chr_01: 36338705-36339204 Setaria viridis
Sevir.1G307100 0.5kb downstream 0.5kb downstream 2334 true Chr_01: 36339205-36341538 Setaria viridis
Sevir.1G307100 0.5kb downstream 0.5kb downstream 500 false Chr_01: 36341039-36341538 Setaria viridis
Sevir.1G307100 1.0kb upstream 1.0kb upstream 2834 true Chr_01: 36338205-36341038 Setaria viridis
Sevir.1G307100 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 36338205-36339204 Setaria viridis
Sevir.1G307100 1.0kb downstream 1.0kb downstream 2834 true Chr_01: 36339205-36342038 Setaria viridis
Sevir.1G307100 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 36341039-36342038 Setaria viridis
Sevir.1G307100 2.0kb upstream 2.0kb upstream 3834 true Chr_01: 36337205-36341038 Setaria viridis
Sevir.1G307100 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 36337205-36339204 Setaria viridis
Sevir.1G307100 2.0kb downstream 2.0kb downstream 3834 true Chr_01: 36339205-36343038 Setaria viridis
Sevir.1G307100 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 36341039-36343038 Setaria viridis
Sevir.1G307100 5.0kb upstream 5.0kb upstream 6834 true Chr_01: 36334205-36341038 Setaria viridis
Sevir.1G307100 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 36334205-36339204 Setaria viridis
Sevir.1G307100 5.0kb downstream 5.0kb downstream 6834 true Chr_01: 36339205-36346038 Setaria viridis
Sevir.1G307100 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 36341039-36346038 Setaria viridis
Sevir.1G307100 10.0kb upstream 10.0kb upstream 11834 true Chr_01: 36329205-36341038 Setaria viridis
Sevir.1G307100 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 36329205-36339204 Setaria viridis
Sevir.1G307100 10.0kb downstream 10.0kb downstream 11834 true Chr_01: 36339205-36351038 Setaria viridis
Sevir.1G307100 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 36341039-36351038 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041044 5273 Angiosperm View MSA
122185943 5267 Panicoideae View MSA
124570942 5269 Grass View MSA
121352143 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain