Gene : Sevir.9G224700 S. viridis v2.1
Defline:  (1 of 1) PTHR11766:SF0 - TYROSINE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  2489
Name:  ? Sevir.9G224700 Secondary Identifier:  ? PAC:40613979
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis TRNA-CHARGING-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G224700 0.5kb upstream 0.5kb upstream 4895 true Chr_09: 16860064-16864958 Setaria viridis
Sevir.9G224700 0.5kb upstream 0.5kb upstream 500 false Chr_09: 16864459-16864958 Setaria viridis
Sevir.9G224700 0.5kb downstream 0.5kb downstream 4895 true Chr_09: 16859564-16864458 Setaria viridis
Sevir.9G224700 0.5kb downstream 0.5kb downstream 500 false Chr_09: 16859564-16860063 Setaria viridis
Sevir.9G224700 1.0kb upstream 1.0kb upstream 5395 true Chr_09: 16860064-16865458 Setaria viridis
Sevir.9G224700 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 16864459-16865458 Setaria viridis
Sevir.9G224700 1.0kb downstream 1.0kb downstream 5395 true Chr_09: 16859064-16864458 Setaria viridis
Sevir.9G224700 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 16859064-16860063 Setaria viridis
Sevir.9G224700 2.0kb upstream 2.0kb upstream 6395 true Chr_09: 16860064-16866458 Setaria viridis
Sevir.9G224700 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 16864459-16866458 Setaria viridis
Sevir.9G224700 2.0kb downstream 2.0kb downstream 6395 true Chr_09: 16858064-16864458 Setaria viridis
Sevir.9G224700 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 16858064-16860063 Setaria viridis
Sevir.9G224700 5.0kb upstream 5.0kb upstream 9395 true Chr_09: 16860064-16869458 Setaria viridis
Sevir.9G224700 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 16864459-16869458 Setaria viridis
Sevir.9G224700 5.0kb downstream 5.0kb downstream 9395 true Chr_09: 16855064-16864458 Setaria viridis
Sevir.9G224700 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 16855064-16860063 Setaria viridis
Sevir.9G224700 10.0kb upstream 10.0kb upstream 14395 true Chr_09: 16860064-16874458 Setaria viridis
Sevir.9G224700 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 16864459-16874458 Setaria viridis
Sevir.9G224700 10.0kb downstream 10.0kb downstream 14395 true Chr_09: 16850064-16864458 Setaria viridis
Sevir.9G224700 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 16850064-16860063 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189928 5267 Panicoideae View MSA
124584962 5269 Grass View MSA
122042111 5273 Angiosperm View MSA
121344516 5274 Embryophyte View MSA
123424944 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain