Gene : Sevir.9G229000 S. viridis v2.1
Defline:  (1 of 2) PTHR10584//PTHR10584:SF180 - SUGAR KINASE // SUBFAMILY NOT NAMED Genomic Order:  2536
Name:  ? Sevir.9G229000 Secondary Identifier:  ? PAC:40614315
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY66-373 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G229000 0.5kb upstream 0.5kb upstream 3821 true Chr_09: 17253829-17257649 Setaria viridis
Sevir.9G229000 0.5kb upstream 0.5kb upstream 500 false Chr_09: 17257150-17257649 Setaria viridis
Sevir.9G229000 0.5kb downstream 0.5kb downstream 3821 true Chr_09: 17253329-17257149 Setaria viridis
Sevir.9G229000 0.5kb downstream 0.5kb downstream 500 false Chr_09: 17253329-17253828 Setaria viridis
Sevir.9G229000 1.0kb upstream 1.0kb upstream 4321 true Chr_09: 17253829-17258149 Setaria viridis
Sevir.9G229000 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 17257150-17258149 Setaria viridis
Sevir.9G229000 1.0kb downstream 1.0kb downstream 4321 true Chr_09: 17252829-17257149 Setaria viridis
Sevir.9G229000 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 17252829-17253828 Setaria viridis
Sevir.9G229000 2.0kb upstream 2.0kb upstream 5321 true Chr_09: 17253829-17259149 Setaria viridis
Sevir.9G229000 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 17257150-17259149 Setaria viridis
Sevir.9G229000 2.0kb downstream 2.0kb downstream 5321 true Chr_09: 17251829-17257149 Setaria viridis
Sevir.9G229000 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 17251829-17253828 Setaria viridis
Sevir.9G229000 5.0kb upstream 5.0kb upstream 8321 true Chr_09: 17253829-17262149 Setaria viridis
Sevir.9G229000 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 17257150-17262149 Setaria viridis
Sevir.9G229000 5.0kb downstream 5.0kb downstream 8321 true Chr_09: 17248829-17257149 Setaria viridis
Sevir.9G229000 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 17248829-17253828 Setaria viridis
Sevir.9G229000 10.0kb upstream 10.0kb upstream 13321 true Chr_09: 17253829-17267149 Setaria viridis
Sevir.9G229000 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 17257150-17267149 Setaria viridis
Sevir.9G229000 10.0kb downstream 10.0kb downstream 13321 true Chr_09: 17243829-17257149 Setaria viridis
Sevir.9G229000 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 17243829-17253828 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122057815 5267 Panicoideae Singleton cluster - no MSA
124590843 5269 Grass View MSA
122044169 5273 Angiosperm View MSA
121347285 5274 Embryophyte View MSA
123428634 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain