Gene : Sevir.9G122800 S. viridis v2.1
Defline:  (1 of 3) K04564 - superoxide dismutase, Fe-Mn family (SOD2) Genomic Order:  1354
Name:  ? Sevir.9G122800 Secondary Identifier:  ? PAC:40612821
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis DETOX1-PWY Setaria viridis pathologic  
Sviridis DETOX1-PWY-1 Setaria viridis pathologic  
Sviridis PWY-6854 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G122800 0.5kb upstream 0.5kb upstream 3334 true Chr_09: 7698183-7701516 Setaria viridis
Sevir.9G122800 0.5kb upstream 0.5kb upstream 500 false Chr_09: 7701017-7701516 Setaria viridis
Sevir.9G122800 0.5kb downstream 0.5kb downstream 3334 true Chr_09: 7697683-7701016 Setaria viridis
Sevir.9G122800 0.5kb downstream 0.5kb downstream 500 false Chr_09: 7697683-7698182 Setaria viridis
Sevir.9G122800 1.0kb upstream 1.0kb upstream 3834 true Chr_09: 7698183-7702016 Setaria viridis
Sevir.9G122800 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 7701017-7702016 Setaria viridis
Sevir.9G122800 1.0kb downstream 1.0kb downstream 3834 true Chr_09: 7697183-7701016 Setaria viridis
Sevir.9G122800 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 7697183-7698182 Setaria viridis
Sevir.9G122800 2.0kb upstream 2.0kb upstream 4834 true Chr_09: 7698183-7703016 Setaria viridis
Sevir.9G122800 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 7701017-7703016 Setaria viridis
Sevir.9G122800 2.0kb downstream 2.0kb downstream 4834 true Chr_09: 7696183-7701016 Setaria viridis
Sevir.9G122800 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 7696183-7698182 Setaria viridis
Sevir.9G122800 5.0kb upstream 5.0kb upstream 7834 true Chr_09: 7698183-7706016 Setaria viridis
Sevir.9G122800 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 7701017-7706016 Setaria viridis
Sevir.9G122800 5.0kb downstream 5.0kb downstream 7834 true Chr_09: 7693183-7701016 Setaria viridis
Sevir.9G122800 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 7693183-7698182 Setaria viridis
Sevir.9G122800 10.0kb upstream 10.0kb upstream 12834 true Chr_09: 7698183-7711016 Setaria viridis
Sevir.9G122800 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 7701017-7711016 Setaria viridis
Sevir.9G122800 10.0kb downstream 10.0kb downstream 12834 true Chr_09: 7688183-7701016 Setaria viridis
Sevir.9G122800 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 7688183-7698182 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186400 5267 Panicoideae View MSA
124572177 5269 Grass View MSA
122047747 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain