Gene : Sevir.9G116800 S. viridis v2.1
Defline:  (1 of 1) 4.3.1.19 - Threonine ammonia-lyase / Threonine dehydratase Genomic Order:  1292
Name:  ? Sevir.9G116800 Secondary Identifier:  ? PAC:40612134
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis BRANCHED-CHAIN-AA-SYN-PWY Setaria viridis pathologic  
Sviridis ILEUSYN-PWY Setaria viridis pathologic  
Sviridis PWY-3001 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G116800 0.5kb upstream 0.5kb upstream 6811 true Chr_09: 7232173-7238983 Setaria viridis
Sevir.9G116800 0.5kb upstream 0.5kb upstream 500 false Chr_09: 7238484-7238983 Setaria viridis
Sevir.9G116800 0.5kb downstream 0.5kb downstream 6811 true Chr_09: 7231673-7238483 Setaria viridis
Sevir.9G116800 0.5kb downstream 0.5kb downstream 500 false Chr_09: 7231673-7232172 Setaria viridis
Sevir.9G116800 1.0kb upstream 1.0kb upstream 7311 true Chr_09: 7232173-7239483 Setaria viridis
Sevir.9G116800 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 7238484-7239483 Setaria viridis
Sevir.9G116800 1.0kb downstream 1.0kb downstream 7311 true Chr_09: 7231173-7238483 Setaria viridis
Sevir.9G116800 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 7231173-7232172 Setaria viridis
Sevir.9G116800 2.0kb upstream 2.0kb upstream 8311 true Chr_09: 7232173-7240483 Setaria viridis
Sevir.9G116800 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 7238484-7240483 Setaria viridis
Sevir.9G116800 2.0kb downstream 2.0kb downstream 8311 true Chr_09: 7230173-7238483 Setaria viridis
Sevir.9G116800 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 7230173-7232172 Setaria viridis
Sevir.9G116800 5.0kb upstream 5.0kb upstream 11311 true Chr_09: 7232173-7243483 Setaria viridis
Sevir.9G116800 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 7238484-7243483 Setaria viridis
Sevir.9G116800 5.0kb downstream 5.0kb downstream 11311 true Chr_09: 7227173-7238483 Setaria viridis
Sevir.9G116800 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 7227173-7232172 Setaria viridis
Sevir.9G116800 10.0kb upstream 10.0kb upstream 16311 true Chr_09: 7232173-7248483 Setaria viridis
Sevir.9G116800 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 7238484-7248483 Setaria viridis
Sevir.9G116800 10.0kb downstream 10.0kb downstream 16311 true Chr_09: 7222173-7238483 Setaria viridis
Sevir.9G116800 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 7222173-7232172 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040897 5273 Angiosperm View MSA
122175498 5267 Panicoideae View MSA
124581536 5269 Grass View MSA
121344792 5274 Embryophyte View MSA
123427671 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain