Gene : Sevir.9G116500 S. viridis v2.1
Defline:  (1 of 1) K03934 - NADH dehydrogenase (ubiquinone) Fe-S protein 1 (NDUFS1) Genomic Order:  1289
Name:  ? Sevir.9G116500 Secondary Identifier:  ? PAC:40617144
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-3781 Setaria viridis pathologic  
Sviridis PWY-4302 Setaria viridis pathologic  
Sviridis PWY-5083 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G116500 0.5kb upstream 0.5kb upstream 4378 true Chr_09: 7219172-7223549 Setaria viridis
Sevir.9G116500 0.5kb upstream 0.5kb upstream 500 false Chr_09: 7219172-7219671 Setaria viridis
Sevir.9G116500 0.5kb downstream 0.5kb downstream 4378 true Chr_09: 7219672-7224049 Setaria viridis
Sevir.9G116500 0.5kb downstream 0.5kb downstream 500 false Chr_09: 7223550-7224049 Setaria viridis
Sevir.9G116500 1.0kb upstream 1.0kb upstream 4878 true Chr_09: 7218672-7223549 Setaria viridis
Sevir.9G116500 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 7218672-7219671 Setaria viridis
Sevir.9G116500 1.0kb downstream 1.0kb downstream 4878 true Chr_09: 7219672-7224549 Setaria viridis
Sevir.9G116500 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 7223550-7224549 Setaria viridis
Sevir.9G116500 2.0kb upstream 2.0kb upstream 5878 true Chr_09: 7217672-7223549 Setaria viridis
Sevir.9G116500 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 7217672-7219671 Setaria viridis
Sevir.9G116500 2.0kb downstream 2.0kb downstream 5878 true Chr_09: 7219672-7225549 Setaria viridis
Sevir.9G116500 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 7223550-7225549 Setaria viridis
Sevir.9G116500 5.0kb upstream 5.0kb upstream 8878 true Chr_09: 7214672-7223549 Setaria viridis
Sevir.9G116500 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 7214672-7219671 Setaria viridis
Sevir.9G116500 5.0kb downstream 5.0kb downstream 8878 true Chr_09: 7219672-7228549 Setaria viridis
Sevir.9G116500 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 7223550-7228549 Setaria viridis
Sevir.9G116500 10.0kb upstream 10.0kb upstream 13878 true Chr_09: 7209672-7223549 Setaria viridis
Sevir.9G116500 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 7209672-7219671 Setaria viridis
Sevir.9G116500 10.0kb downstream 10.0kb downstream 13878 true Chr_09: 7219672-7233549 Setaria viridis
Sevir.9G116500 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 7223550-7233549 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187508 5267 Panicoideae View MSA
124571423 5269 Grass View MSA
122044121 5273 Angiosperm View MSA
121350903 5274 Embryophyte View MSA
123424434 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain