Gene : Sevir.9G098000 S. viridis v2.1
Defline:  (1 of 2) PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL Genomic Order:  1090
Name:  ? Sevir.9G098000 Secondary Identifier:  ? PAC:40614408
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis GLYSYN-PWY Setaria viridis pathologic  
Sviridis PWY-2161 Setaria viridis pathologic  
Sviridis PWY-3841 Setaria viridis pathologic  
Sviridis SER-GLYSYN-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G098000 0.5kb upstream 0.5kb upstream 6287 true Chr_09: 5983661-5989947 Setaria viridis
Sevir.9G098000 0.5kb upstream 0.5kb upstream 500 false Chr_09: 5989448-5989947 Setaria viridis
Sevir.9G098000 0.5kb downstream 0.5kb downstream 6287 true Chr_09: 5983161-5989447 Setaria viridis
Sevir.9G098000 0.5kb downstream 0.5kb downstream 500 false Chr_09: 5983161-5983660 Setaria viridis
Sevir.9G098000 1.0kb upstream 1.0kb upstream 6787 true Chr_09: 5983661-5990447 Setaria viridis
Sevir.9G098000 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 5989448-5990447 Setaria viridis
Sevir.9G098000 1.0kb downstream 1.0kb downstream 6787 true Chr_09: 5982661-5989447 Setaria viridis
Sevir.9G098000 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 5982661-5983660 Setaria viridis
Sevir.9G098000 2.0kb upstream 2.0kb upstream 7787 true Chr_09: 5983661-5991447 Setaria viridis
Sevir.9G098000 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 5989448-5991447 Setaria viridis
Sevir.9G098000 2.0kb downstream 2.0kb downstream 7787 true Chr_09: 5981661-5989447 Setaria viridis
Sevir.9G098000 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 5981661-5983660 Setaria viridis
Sevir.9G098000 5.0kb upstream 5.0kb upstream 10787 true Chr_09: 5983661-5994447 Setaria viridis
Sevir.9G098000 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 5989448-5994447 Setaria viridis
Sevir.9G098000 5.0kb downstream 5.0kb downstream 10787 true Chr_09: 5978661-5989447 Setaria viridis
Sevir.9G098000 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 5978661-5983660 Setaria viridis
Sevir.9G098000 10.0kb upstream 10.0kb upstream 15787 true Chr_09: 5983661-5999447 Setaria viridis
Sevir.9G098000 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 5989448-5999447 Setaria viridis
Sevir.9G098000 10.0kb downstream 10.0kb downstream 15787 true Chr_09: 5973661-5989447 Setaria viridis
Sevir.9G098000 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 5973661-5983660 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187926 5267 Panicoideae View MSA
124570013 5269 Grass View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain