Gene : Sevir.3G113500 S. viridis v2.1
Defline:  (1 of 1) PTHR13697//PTHR13697:SF23 - PHOSPHOFRUCTOKINASE // SUBFAMILY NOT NAMED Genomic Order:  1238
Name:  ? Sevir.3G113500 Secondary Identifier:  ? PAC:40650400
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis ANAEROFRUCAT-PWY Setaria viridis pathologic  
Sviridis ANAGLYCOLYSIS-PWY Setaria viridis pathologic  
Sviridis PWY-1042 Setaria viridis pathologic  
Sviridis PWY-5464 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G113500 0.5kb upstream 0.5kb upstream 3091 true Chr_03: 7458858-7461948 Setaria viridis
Sevir.3G113500 0.5kb upstream 0.5kb upstream 500 false Chr_03: 7458858-7459357 Setaria viridis
Sevir.3G113500 0.5kb downstream 0.5kb downstream 3091 true Chr_03: 7459358-7462448 Setaria viridis
Sevir.3G113500 0.5kb downstream 0.5kb downstream 500 false Chr_03: 7461949-7462448 Setaria viridis
Sevir.3G113500 1.0kb upstream 1.0kb upstream 3591 true Chr_03: 7458358-7461948 Setaria viridis
Sevir.3G113500 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 7458358-7459357 Setaria viridis
Sevir.3G113500 1.0kb downstream 1.0kb downstream 3591 true Chr_03: 7459358-7462948 Setaria viridis
Sevir.3G113500 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 7461949-7462948 Setaria viridis
Sevir.3G113500 2.0kb upstream 2.0kb upstream 4591 true Chr_03: 7457358-7461948 Setaria viridis
Sevir.3G113500 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 7457358-7459357 Setaria viridis
Sevir.3G113500 2.0kb downstream 2.0kb downstream 4591 true Chr_03: 7459358-7463948 Setaria viridis
Sevir.3G113500 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 7461949-7463948 Setaria viridis
Sevir.3G113500 5.0kb upstream 5.0kb upstream 7591 true Chr_03: 7454358-7461948 Setaria viridis
Sevir.3G113500 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 7454358-7459357 Setaria viridis
Sevir.3G113500 5.0kb downstream 5.0kb downstream 7591 true Chr_03: 7459358-7466948 Setaria viridis
Sevir.3G113500 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 7461949-7466948 Setaria viridis
Sevir.3G113500 10.0kb upstream 10.0kb upstream 12591 true Chr_03: 7449358-7461948 Setaria viridis
Sevir.3G113500 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 7449358-7459357 Setaria viridis
Sevir.3G113500 10.0kb downstream 10.0kb downstream 12591 true Chr_03: 7459358-7471948 Setaria viridis
Sevir.3G113500 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 7461949-7471948 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121992979 5273 Angiosperm View MSA
122179122 5267 Panicoideae View MSA
124573896 5269 Grass View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain