Gene : Sevir.4G235800 S. viridis v2.1
Defline:  (1 of 2) K00761 - uracil phosphoribosyltransferase (upp, UPRT) Genomic Order:  2547
Name:  ? Sevir.4G235800 Secondary Identifier:  ? PAC:40600503
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7183 Setaria viridis pathologic  
Sviridis PWY-7196 Setaria viridis pathologic  
Sviridis PWY-7208 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.4G235800 0.5kb upstream 0.5kb upstream 5593 true Chr_04: 33747661-33753253 Setaria viridis
Sevir.4G235800 0.5kb upstream 0.5kb upstream 500 false Chr_04: 33747661-33748160 Setaria viridis
Sevir.4G235800 0.5kb downstream 0.5kb downstream 5593 true Chr_04: 33748161-33753753 Setaria viridis
Sevir.4G235800 0.5kb downstream 0.5kb downstream 500 false Chr_04: 33753254-33753753 Setaria viridis
Sevir.4G235800 1.0kb upstream 1.0kb upstream 6093 true Chr_04: 33747161-33753253 Setaria viridis
Sevir.4G235800 1.0kb upstream 1.0kb upstream 1000 false Chr_04: 33747161-33748160 Setaria viridis
Sevir.4G235800 1.0kb downstream 1.0kb downstream 6093 true Chr_04: 33748161-33754253 Setaria viridis
Sevir.4G235800 1.0kb downstream 1.0kb downstream 1000 false Chr_04: 33753254-33754253 Setaria viridis
Sevir.4G235800 2.0kb upstream 2.0kb upstream 7093 true Chr_04: 33746161-33753253 Setaria viridis
Sevir.4G235800 2.0kb upstream 2.0kb upstream 2000 false Chr_04: 33746161-33748160 Setaria viridis
Sevir.4G235800 2.0kb downstream 2.0kb downstream 7093 true Chr_04: 33748161-33755253 Setaria viridis
Sevir.4G235800 2.0kb downstream 2.0kb downstream 2000 false Chr_04: 33753254-33755253 Setaria viridis
Sevir.4G235800 5.0kb upstream 5.0kb upstream 10093 true Chr_04: 33743161-33753253 Setaria viridis
Sevir.4G235800 5.0kb upstream 5.0kb upstream 5000 false Chr_04: 33743161-33748160 Setaria viridis
Sevir.4G235800 5.0kb downstream 5.0kb downstream 10093 true Chr_04: 33748161-33758253 Setaria viridis
Sevir.4G235800 5.0kb downstream 5.0kb downstream 5000 false Chr_04: 33753254-33758253 Setaria viridis
Sevir.4G235800 10.0kb upstream 10.0kb upstream 15093 true Chr_04: 33738161-33753253 Setaria viridis
Sevir.4G235800 10.0kb upstream 10.0kb upstream 10000 false Chr_04: 33738161-33748160 Setaria viridis
Sevir.4G235800 10.0kb downstream 10.0kb downstream 15093 true Chr_04: 33748161-33763253 Setaria viridis
Sevir.4G235800 10.0kb downstream 10.0kb downstream 10000 false Chr_04: 33753254-33763253 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175140 5267 Panicoideae View MSA
124585714 5269 Grass View MSA
122047935 5273 Angiosperm View MSA
121345361 5274 Embryophyte View MSA
123424478 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain